Copy-Number Variations Observed in a Japanese Population by BAC Array CGH: Summary of Relatively Rare CNVs

Table 1

Summary of the CNVs detected in plural unrelated individuals.

Clone; number	Chrom.; number	Position; (Mb)	Variants		Known; variant	Segmental; duplication	Hiroshima^(2)	Nagasaki^(3)	Redon^(4)	Redon^(5)	Park et al.	Ikeda et al.
			Amp^(1)	Delete					[4]	[4]	[24]	[25]
RP11-81B15	1	150.7	9	0	Pre^(6)	Abs^(8)	4	5	Abs^(10)	Abs	Pre	Abs
RP11-91G12	1	194.9	2	0	Pre	Pre^(9)	2	0	Abs	Abs	Pre	Pre
RP11-118M12	2	241.2	3	0	Pre	Pre	0	3	Pre^(11)	Pre	Abs	Abs
RP11-91F17	3	167.5	2	0	Pre	Abs	2	0	Abs	Abs	Abs	Abs
RP11-101J14	4	8.1	2	0	Pre	Abs	0	2	Abs	Abs	Abs	Abs
RP11-80P12	4	132.3	2	0	Pre	Abs	1	1	Abs	Abs	Abs	Abs
RP11-23D23	7	0.84	4	0	Pre	Abs	3	1	Abs	Abs	Abs	Abs
RP11-90C3	7	64.3	1	1	Pre	Abs	1	1	Pre	Abs	Pre	Pre
RP11-35P20	7	71.6	2	0	Pre	Pre	0	2	Pre	Pre	Pre	Abs
RP11-45M12	8	3.9	0	2	Pre	Abs	2	0	Pre	Pre	Pre	Abs
RP11-113B7	8	4.2	0	4	Pre	Abs	4	0	Pre	Pre	Abs	Abs
RP11-89I12	8	4.4	0	4	Pre	Abs	4	0	Pre	Pre	Pre	Abs
RP11-79I19	8	3.7	0	4	Pre	Abs	4	0	Pre	Pre	Abs	Abs
RP11-310C13	9	113.5	6	1	Abs^(7)	Abs	5	2	Abs	Abs	Abs	Abs
RP11-79M9	10	77.7	6	0	Abs	Abs	4	2	Abs	Abs	Abs	Abs
RP11-326B4	13	66.8	8	0	Abs	Abs	5	3	Abs	Abs	Abs	Abs
RP11-89A14	13	82.4	5	0	Pre	Abs	4	1	Abs	Abs	Abs	Abs
RP11-531P20	13	84.4	2	0	Pre	Abs	2	0	Abs	Pre	Abs	Abs
RP11-143O10	13	88.5	4	0	Pre	Abs	2	2	Abs	Abs	Pre	Abs
RP11-91C17	14	43.2	5	0	Abs	Abs	3	2	Abs	Abs	Abs	Abs
RP11-194H7	15	32.5	2	0	Pre	Pre	2	0	Pre	Abs	Abs	Abs
RP11-152F13	15	80.9	0	9	Pre	Pre	5	4	Pre	Abs	Abs	Abs
RP11-88B2	18	61.8	0	2	Pre	Abs	0	2	Pre	Abs	Pre	Abs
RP11-13J15	21	24.1	0	4	Pre	Abs	2	2	Abs	Abs	Abs	Pre
CTA-526G4	22	20.6	1	2	Pre	Abs	2	1	Pre	Abs	Abs	Pre
Total of CNVs			66	33			63	36

⁽¹⁾Amplification. Number of CNVs observed in Hiroshima individual ⁽²⁾and in Nagasaki individual ⁽³⁾. ⁽⁴⁾Radon's BAC data. ⁽⁵⁾Radon's oligo-array data. CNVs present ⁽⁶⁾or absent ⁽⁷⁾in previous papers. Segmental duplication absent ⁽⁸⁾or present ⁽⁹⁾in BAC-clones on which CNVs were observed. CNVs absent ⁽¹⁰⁾or present ⁽¹¹⁾in Japanese.