BioMed Research International / 2013 / Article / Tab 5

Research Article

Analysis of Structures and Epitopes of Surface Antigen Glycoproteins Expressed in Bradyzoites of Toxoplasma gondii

Table 5

Predicted HLA restricted CD8+ T cell epitopes for SAG2C, -2D of T. gondii.

AlleleSequencePecentile rankMethod usedLocation

HLA-A*0201 VVLGSAFMI3.4Consensus (ANN, SMM, CombLib  Sidenev 2008)342–350174–182
HLA-A*0201FMIAFISCF1.4Consensus (ANN, SMM, CombLib Sidenev 2008)348–356180–188
HLA-A*0201AFISCFALV2.8Consensus (ANN,  SMM)351–359183–191
HLA-A*1101QVTVAVTSK1.45Consensus (ANN, SMM)206–21438–46
HLA-A*1101SSPQNIFYK0.2Consensus (ANN, SMM)290–298122–130
HLA-A*1101QVGTQTECK2.35Consensus (ANN, SMM)308–316140–148
HLA-A*1101KVLINIEEK1Consensus (ANN, SMM)316–324148–156
HLA-B*0702LPSSPQNIF1.1Consensus (ANN, SMM, CombLib Sidenev 2008)288–296120–128
HLA-B*0702KPEAETPAT2.6Consensus (ANN, SMM, CombLib Sidenev 2008)324–332156–164