Research Article
Analysis of Structures and Epitopes of Surface Antigen Glycoproteins Expressed in Bradyzoites of Toxoplasma gondii
Table 5
Predicted HLA restricted CD8+ T cell epitopes for SAG2C, -2D of T. gondii.
| | Allele | Sequence | Pecentile rank | Method used | Location | | SAG2C | SAG2D |
| | HLA-A*0201 | VVLGSAFMI | 3.4 | Consensus (ANN, SMM, CombLib Sidenev 2008) | 342–350 | 174–182 | | HLA-A*0201 | FMIAFISCF | 1.4 | Consensus (ANN, SMM, CombLib Sidenev 2008) | 348–356 | 180–188 | | HLA-A*0201 | AFISCFALV | 2.8 | Consensus (ANN, SMM) | 351–359 | 183–191 | | HLA-A*1101 | QVTVAVTSK | 1.45 | Consensus (ANN, SMM) | 206–214 | 38–46 | | HLA-A*1101 | SSPQNIFYK | 0.2 | Consensus (ANN, SMM) | 290–298 | 122–130 | | HLA-A*1101 | QVGTQTECK | 2.35 | Consensus (ANN, SMM) | 308–316 | 140–148 | | HLA-A*1101 | KVLINIEEK | 1 | Consensus (ANN, SMM) | 316–324 | 148–156 | | HLA-B*0702 | LPSSPQNIF | 1.1 | Consensus (ANN, SMM, CombLib Sidenev 2008) | 288–296 | 120–128 | | HLA-B*0702 | KPEAETPAT | 2.6 | Consensus (ANN, SMM, CombLib Sidenev 2008) | 324–332 | 156–164 |
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