Prokaryotic Phylogenies Inferred from Whole-Genome Sequence and Annotation Data

Table 3

The performance results of accuracy by five methods.

DS	NoS	GCD^*(%)	OG^*(%)	CT^(%)	Com^*(%)	CGC^(%)
1	52	86.44	83.93	92.17	90.29	98.83
2	53	86.40	85.49	87.92	90.74	95.29
3	54	87.34	88.27	91.47	96.55	98.91
4	82	92.58	84.35	98.87	96.16	96.59
5	96	85.45	87.22	99.24	99.26	99.29
6	165	77.98	87.87	89.86	94.38	98.04
7	181	89.74	80.34	90.08	95.67	96.35
8	277	84.04	81.89	93.88	90.71	96.00
9	398	86.56	85.52	92.28	90.07	93.56

DS: datasets; NoS: number of species; GCD: gene content distance; OG: overlapping gene distance; CT: CVTree, 𝐾=5; Com: ComPhy; CGC: CGCPhy. *The results of GCD, OG, and ComPhy obtained from reference [5].