An Accurate Method for Prediction of Protein-Ligand Binding Site on Protein Surface Using SVM and Statistical Depth Function

Figure 2

An illustration of the half-space depth function. The protein surface (PDBID: 10 gs) is colored by the statistical depth value of the residues. The color is gradually change from blue to red according to the depth values of the residues. The deepest residues are red, and the convex residues are blue. All the figures of the protein surface are created by Pymol.