BioMed Research International / 2013 / Article / Tab 1

Research Article

Method for Rapid Protein Identification in a Large Database

Table 1

Scale change in nonspecific digestion.

DBVersionFasta size (MB)No. of proteinsNo. of peptide fragmentsIndex size (GB)

ipi.HUMAN3.8748.7191,4911,939,985,47744.44
UNIPROT-SPROT201108240.51532,2349,964,797,926235.51

Note: peptide mass is 300–8000 Dalton. Peptide length is 3–60 amino acids.

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