Research Article

Characterization of the Bacterial Community Associated with Larvae and Adults of Anoplophora chinensis Collected in Italy by Culture and Culture-Independent Methods

Table 3

Closest relatives of bacterial 16S rRNA gene sequences of DGGE bands obtained from larvae and adults of Anoplophora  chinensis.

BandClosest relative (accession no.)Identity (%)Bacterial division

1Ralstonia  solanacearum (JQ655458)100Betaproteobacteria
34Ralstonia  sp. (JN714979)99.1–99.7Betaproteobacteria
2Uncultured Massilia sp. (EF075289)99.3Betaproteobacteria
35Uncultured Massilia sp. (JN648276)99.3Betaproteobacteria
37Massilia sp. (AB623119)98.4Betaproteobacteria
3, 17Raoultella  terrigena (AY292875)100Gammaproteobacteria
Enterobacter sp. (AB673457)99.2–99.6Gammaproteobacteria
14, 15, 23, 24Uncultured Raoultella sp. (FJ467399)99.2–99.8Gammaproteobacteria
Raoultella  terrigena (JN815233)99.0–99.6Gammaproteobacteria
18, 19, 20, 21Raoultella  ornithinolytica (HE578796)98.4–99.8Gammaproteobacteria
47, 48, 49, 50, 51Raoultella  planticola (JN835545)99.2–99.6Gammaproteobacteria
52Raoultella  ornithinolytica (HQ242732)98.4Gammaproteobacteria
53Raoultella  planticola (HE610795)99.6Gammaproteobacteria
56Uncultured  Raoultella sp. (FJ467399)99.6Gammaproteobacteria
58Raoultella  terrigena (GQ169108)100Gammaproteobacteria
62Raoultella  ornithinolytica (HQ242729)99.8Gammaproteobacteria
10Gammaproteobacterium (EF111244)99.8Gammaproteobacteria
11Rahnella sp. (JQ864392)99.7Gammaproteobacteria
12, 16Gibbsiella  dentisursi (AB566415)99.7Gammaproteobacteria
22Pseudomonas sp. (JQ522968)99.0Gammaproteobacteria
25, 42, 45, 28Klebsiella sp. (GU301269)99.6–99.8Gammaproteobacteria
27, 44, 43, 26Klebsiella  oxytoca (JF772070)99.4–99.8Gammaproteobacteria
54, 59Klebsiella  sp. CPK (GU301269)99.6Gammaproteobacteria
57Klebsiella  oxytoca (JX196648)99.2Gammaproteobacteria
29, 46Enterobacter sp. JJDP1 (JQ726698)100Gammaproteobacteria
32Enterobacter sp. ZYXCA1 (JN107752)100Gammaproteobacteria
33Enterobacter sp. IICDBZ6 (JN836923)99.8Gammaproteobacteria
55Enterobacter  ludwigii (KC139450)98.7Gammaproteobacteria
67Enterobacter  sp. (JN129489)98.9Gammaproteobacteria
36Nevskia sp. (JQ710439)100Gammaproteobacteria
63Enterobacteriaceae  bacterium (HM235485)99.8Gammaproteobacteria
65Buttiauxella  sp. (JF281151)99.8Gammaproteobacteria
66Buttiauxella  sp. (JX406856)99.8Gammaproteobacteria
4Methylobacterium sp. (FJ225120)100Alphaproteobacteria
5, 38Methylobacterium  populi (JQ660234)99.7–100Alphaproteobacteria
39Brevundimonas sp. S2U9 (HE814668)100Alphaproteobacteria
40Sphingomonas sp. D40y (HE962513)100Alphaproteobacteria
6, 8Enterococcus sp. (JF813181)99.0–100Firmicutes
7Enterococcus  gallinarum (JQ805717)100Firmicutes
9Enterococcus  casseliflavus (JX035954)100Firmicutes
61Lysinibacillus  sphaericus (JN377788)98.7Firmicutes
13, 41Microbacterium sp. (EU584504)100Actinobacteria
30Uncultured bacterium (JN394024)99.8Unclassified
64Uncultured bacterium (GQ411142)99.6Unclassified
60Uncultured  Chitinophaga  sp. (KC110981)100Bacteroidetes
31Uncultured plastid (HM270514)100Eucariote plastid