BioMed Research International / 2013 / Article / Tab 3

Research Article

On the Difference in Quality between Current Heuristic and Optimal Solutions to the Protein Structure Alignment Problem

Table 3

Average accuracy computed on the set of 68 pairs of proteins that belong to the same FSSP superfamily.

NumPairs(3)PSI(3)SI

STRUCTAL
 Original47.710.588.41
 Near-optimal50.090.617.61
TM-align
 Original51.400.626.11
 Near-optimal52.710.646.10
LOCK2
 Original48.630.598.17
 Near-optimal55.370.675.85

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