Phylogenetic Analysis of Stenotrophomonas spp. Isolates Contributes to the Identification of Nosocomial and Community-Acquired Infections

Table 1

Nosocomial isolates, clinical and environmental strains, and type strains of Stenotrophomonas spp.

Strains	Source
Nosocomial strains
HIAE 1911, HIAE 1990, HIAE 1998, HIAE 2336,; HIAE 2425, HIAE 2737, HIAE 2947, HIAE 3182,; HIAE 3338, HIAE 3576, HIAE 3730, HIAE 3808,; HIAE 4003, HIAE 4249, HIAE 4471, HIAE 4500,; HIAE 4600, HIAE 4638, HIAE 4800, HIAE 4920,; HIAE 4948, HIAE 5124, HIAE 5399^U	Tracheal secretion
HIAE 2229, HIAE 2505	Drain secretion
HIAE 5180	Leg ulcer
HIAE 3369	Human blood culture
HIAE 5188	Eye secretion
HIAE 3673	Brochoalveolar lavage
Clinical strains
LMG 957, LMG 10851, LMG 10857*, LMG 10874*, LMG 11114	Human blood culture
LMG 10853*	Tracheal secretion
LMG 10877*	Patient suffering from sinusitis, pus
LMG 10989	Bile
LMG 10991*	Leg, pus
LMG 10992	Expectoration
LMG 11002	Mamilla
LMG 11004	Urine
LMG 22072	Cerebrospinal fluid
Environmental strains
LMG 11089, LMG 11090	Cichorium intybus rhizosphere
LMG 11105, LMG 11108	Triticum roots
LMG 6608	rhizosphere
Type strains
LMG 958 S. maltophilia	Cortical necrosis
LMG 22073 S. acidaminiphila	Mud
LMG 22074 S. nitritireducens*	Laboratory scale filter
LMG 25348 S. pavanii	Sugar cane
DSMZ 17805 S. koreensis*	Compost (straw + manure)

∗Genomic sequences deposited in the GenBank were utilized in addition to sequences obtained in our laboratory for the genomic analysis by MLST. ^UStrains collected in the ICU of Hospital Israelita Albert Einstein (HIAE).