Research Article
1,3,4-Oxadiazole Derivatives: Synthesis, Characterization, Antimicrobial Potential, and Computational Studies
Table 7
Ligand-receptor interaction of synthesized 1,3,4-oxadiazole derivatives with peptide deformylase.
| Compound | Docking score (binding energy) | Distance (Å) | Amino acid | Group involved in interaction with receptor |
| 6e | −77.213 | 2.63 | Lys 150 | Oxygen of oxadiazole ring | 2.53 | Lys 150 | Nitrogen of oxadiazole ring | 6f | −135.787 | 2.72 | Lys 150 | Nitrogen of oxadiazole ring | 2.88 | Lys 150 | Oxygen of oxadiazole ring | 8e | −146.825 | 3.46 | Lys 150 | Nitrogen of oxadiazole ring | 4.27 | Lys 150 | Nitrogen of oxadiazole ring | 8f | −138.439 | 3.50 | Lys 150 | Oxygen of oxadiazole ring | 3.21 | Lys 150 | Nitrogen of oxadiazole ring | 3.21 | Lys 150 | Nitrogen of oxadiazole ring | 8h | −151.632 | 3.40 | Lys 150 | Oxygen of oxadiazole ring | 3.41 | Lys 150 | Nitrogen of oxadiazole ring | 3.19 | Lys 150 | Nitrogen of oxadiazole ring | 13b | −88.30 | 3.19 | Arg 97 | Oxygen of oxadiazole ring | 13c | −96.604 | 3.31 | Lys 150 | Nitrogen of oxadiazole ring | 3.49 | Lys 150 | Oxygen of oxadiazole ring | 2.69 | Arg 97 | Nitrogen of nitro group | 13e | −153.44 | 2.95 | Lys 157 | Oxygen of hydroxyl group | 2.02 | Arg 153 | Oxygen of methoxy group | 3.26 | Lys 150 | Oxygen of oxadiazole ring | 13g | −81.702 | 2.06 | Arg 153 | Oxygen of nitro group | 3.05 | Arg 153 | Oxygen of oxadiazole ring | Amoxicillin | −128.027 | 3.54 | Arg 153 | Oxygen of –COOH group | Cefixime | −153.288 | 2.76 | Lys 150 | Nitrogen of -lactam |
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