Structural Insight into the DNA-Binding Mode of the Primosomal Proteins PriA, PriB, and DnaT

Table 1

List of the structures of the primosomal proteins available in Protein Data Bank.

	PDB ID	X-ray	NMR	Length
PriA	2D7E	The N-terminal domain of Escherichia coli PriA		105
	2DwN	The N-terminal domain of Escherichia coli PriA bound to AG		105
	2D7G	The N-terminal domain of Escherichia coli PriA bound to AA		105
	2D7H	The N-terminal domain of Escherichia coli PriA bound to CCC		105
	2Dwl	The N-terminal domain of Escherichia coli PriA bound to AC		105
	2Dwm	The N-terminal domain of Escherichia coli PriA bound to AT		105
	4NL4	Klebsiella pneumoniae PriA bound to ADP		731
	4NL8	Klebsiella pneumoniae PriA bound to SSB C-terminal tail peptide		731
PriB	2CCZ	Escherichia coli PriB bound to ssDNA (15 mer)		104
	1V1Q	Escherichia coli PriB		104
	1WOC	Escherichia coli PriB		100
	1TXY	Escherichia coli PriB		100
	2PNH	Escherichia coli PriB E39A		100
	4APV	Klebsiella pneumoniae PriB		102
	3K8A	Neisseria gonorrhoeae PriB		100
	4FDB	Ralstonia solanacearum PriB		99
	3EN2	Ralstonia solanacearum PriB		95
	3FHW	Bordetella parapertussis PriB		102
	3KLW	Bordetella pertussis PriB		98
	4GS3	The N-terminal domain of Thermoanaerobacter tengcongensis PriB		104
DnaT		None
DnaB	4ESV	Geobacillus stearothermophilus DnaB bound to DNA (14 mer)		441
	2R6E	Geobacillus stearothermophilus DnaB		441
	2R6D	Geobacillus stearothermophilus DnaB		441
	2R6A	Geobacillus stearothermophilus DnaB bound to DnaG		441
	2R6C	Geobacillus stearothermophilus DnaB bound to DnaG		441
	4M4W	Geobacillus stearothermophilus DnaB bound to DnaG and DnaI		454
	2R5U	The N-terminal domain of Mycobacterium tuberculosis DnaB		167
	2Q6T	Thermus aquaticus DnaB		440
	3GXV	The N-terminal domain of Helicobacter pylori DnaB		121
	4A1F	The C-terminal domain of Helicobacter pylori DnaB		323
	4NMN	Aquifex aeolicus DnaB bound to ADP		434
	2VYF	Geobacillus kaustophilus DnaC		441
	2VYE	Geobacillus kaustophilus DnaC bound to ssDNA (9 mer)		441
	1B79	The N-terminal domain of Escherichia coli DnaB		128
	1JWE		The N-terminal domain of Escherichia coli DnaB	114
DnaC	3EC2	Aquifex aeolicus DnaC 42–221	The N-terminal domain of Bacillus subtilis DnaI	180
	3ECC	Aquifex aeolicus DnaC bound to ADP		185
	2W58	Geobacillus kaustophilus DnaI		199
	4M4W	Geobacillus stearothermophilus DnaB bound to DnaG and DnaI		278
	2QGZ	Streptococcus pyogenes DnaI		308
	2K7R			106
DnaG	3B39	Escherichia coli DnaG 109–427 bound to ssDNA (15 mer)		321
	1DD9	Escherichia coli DnaG 115–428		338
	1DDE	Escherichia coli DnaG 115–428		338
	1T3W	The C-terminal domain of Escherichia coli DnaG		148
	2HAJ		Escherichia coli DnaG 447–581	135
	4E2K	Staphylococcus aureus DnaG 108–428		321
	4EDG	Staphylococcus aureus DnaG 108–428 bound to ATP		321
	4EDK	Staphylococcus aureus DnaG 108–428 bound to GTP		319
	4EDT	Staphylococcus aureus DnaG 108–428 bound to ppGpp		321
	4EDV	Staphylococcus aureus DnaG 108–428 bound to ppGpp		321
	4EE1	Staphylococcus aureus DnaG 108–428 bound to CTP		321
	4EDR	Staphylococcus aureus DnaG 108–428 bound to UTP		321
	2LZN		Staphylococcus aureus DnaG 462-605	143
	1Z8S		Bacillus stearothermophilus DnaG 452–597	146
	4EHS	The C-terminal domain of Helicobacter pylori DnaG 438–559		122
	4M4W	Geobacillus stearothermophilus DnaB bound to DnaI and DnaG		143
	2R6A	Geobacillus stearothermophilus DnaB bound to DnaG		143
	2R6C	Geobacillus stearothermophilus DnaB bound to DnaG		143
	2AU3	Aquifex aeolicus DnaG 1–403		403
	PriC	2RT6		The N-terminal domain of Escherichia coli PriC	98

Length and amino acid residues.