BioMed Research International / 2014 / Article / Tab 1

Research Article

An Improved Distance Matrix Computation Algorithm for Multicore Clusters

Table 1

Used benchmark dataset specifications.

Benchmark Number of sequences Average length Standard deviation

Human immunodeficiency virus (HIV) 3,000 858 10.745
6,000 858 14.632

HA hemagglutinin (influenza B virus) 2,000 1,741 32.604
4,000 1,728 36.661

Several viruses within the Coronaviridae family 200 30,488 908.534
500 29,414 1,066.417

Herpesviridae (large family of DNA viruses) 20 163,654 47,330.32
50 161,000 42,899.81

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