Bioinformatic Prediction of WSSV-Host Protein-Protein Interaction

Table 2

Predicted interacting proteins between WSSV and the Chinese shrimp.

WSSV_ID	Annotation	Interacting protein in FCT		Database
		FCT_ID	Annotation	STRING	DIP	Reactome
wsv001	Collagen like protein	s_18988	Integrin alpha 4	/	/	√
		s_12679	Integrin alpha 5
		s_3390	Integrin alpha 8
		s_1537	Integrin beta 1
		s_16763	Integrin beta 6
		s_2496	Syndecan
wsv026	hypothetical protein	s_5219	Putative methylase/helicase	√	/	√
wsv067	thymidylate synthetase	s_3110	N/A	√	√	√
		s_13286	N/A
		s_2426	Glycine dehydrogenase
		s_5707	Inosine triphosphatase
		s_2204	Proliferating cell nuclear antigen
		s_3879	Ribonucleotide reductase 1
		s_1099	Thymidine kinase 1
wsv112	dUTP diphosphatase	s_16017	Nucleoside diphosphate kinase	√	√	√
		s_20130	Thymidylate kinase
		s_5707	Inosine triphosphatase
		s_60	Nucleoside diphosphate kinase
		s_3879	Ribonucleotide reductase 1
		s_1099	Thymidine kinase 1
wsv128	hypothetical protein	s_15702	Beta-transducin repeat containing protein	√	/	/
		s_3485	Hypothetical protein
		s_5154	Hypothetical protein
		s_6901	Hypothetical protein
		s_13825	Hypothetical protein
wsv172	Ribonucleoside-diphosphate reductase large chain	s_4560	Adenylate kinase	√	√	√
		s_6839	Minichromosome maintenance complex component 4
		s_60	Nucleoside diphosphate kinase
		s_18721	Cell division control protein 45 homolog
		s_18944	Probable thymidylate synthase
		s_4876	Guanylate kinase
		s_2904	Probable uridylate kinase
		s_1744	Ribonucleoside-diphosphate reductase small chain
		s_20130	Thymidylate kinase
wsv188	Ribonucleoside-diphosphate reductase small chain	s_5545	Adenylate kinase 3	√	√	√
		s_20130	Thymidylate kinase
		s_16017	Nucleoside diphosphate kinase
		s_2904	Probable uridylate kinase
		s_386	Adenylate kinase isoenzyme
		s_4876	Guanylate kinase
		s_20711	Conserved hypothetical protein (Aedes aegypti)
		s_60	Nucleoside diphosphate kinase
		s_4560	Adenylate kinase
		s_3879	Ribonucleotide reductase 1

Note. “/” means absence of prediction in relevant database, while “√” means presence of prediction in relevant database.