miRSeq: A User-Friendly Standalone Toolkit for Sequencing Quality Evaluation and miRNA Profiling
Table 1
The detailed information of analyzed libraries. SRA in the “Source” column denotes that the small RNA libraries were downloaded from NCBI SRA database. The SRA IDs of the libraries were provided. CGMH denotes that the libraries were prepared and sequenced by our research team in Kaohsiung Chang Gung Memorial Hospital.
Library
Organism
Source
Details
L1
Homo sapiens
CGMH
Human breast cancer cell line: MDA-MB-361
L2
Homo sapiens
CGMH
Human prostate cancer cell line: PC3
L3
Rattus norvegicus
CGMH
Normal lung tissue from 4-month rat
L4
Rattus norvegicus
CGMH
Normal lung tissue from 4-month rat
L5
Caenorhabditis elegans
SRA: SRR1175721
Synchronized adult population of nematodes
L6
Caenorhabditis elegans
SRA: SRR1139598
Stage-matched population of nematodes
L7
Drosophila melanogaster
SRA: SRR513989
Abdomens and thoraxes from w1118 male flies infected by Nora virus
