Specific Growth Rate Determines the Sensitivity of Escherichia coli to Lactic Acid Stress: Implications for Predictive Microbiology
Table 1
Summary of estimated inactivation rates during lactic acid stress (pH 4.6, 150 mM lactic acid, ) at 20 and 27°C for strain E. coli 683 following culture in TSB medium in chemostat or batch. Surviving cells were quantified on TSA plates.
Exp. Number1
Growth
Inactivation
Medium2
Method
Temp. (°C)
Biomass (OD600)
Rate (h−1)
Rate at 27°C (h−1)
SE4 of estimated rate
RMSE4 of fit
Mean rate at 20°C (h−1)
SE of estimated rate
RMSE of fit
32
TSB 25%
Chemostat
37
1.29
0.17
0.09
0.01
0.121
0.03
0.005
0.053
33
TSB 25%
Chemostat
37
1.26
0.18
0.08
0.01
0.142
0.01
0.003
0.060
27
TSB 25%
Chemostat
15
0.60
0.20
No result
No result
No result
0.34
0.04
0.549
28
TSB 25%
Chemostat
15
0.98
0.20
0.92
0.12
0.525
0.61
0.05
0.230
12
TSB
Chemostat
37
1.56
0.20
0.13
0.01
0.127
0.03
0.01
0.070
16
TSB
Chemostat
37
0.99
0.20
0.17
0.01
0.066
0.06
0.005
0.063
26
TSB 25%
Chemostat
20
1.62
0.22
0.42
0.06
0.832
0.18
0.02
0.348
34
TSB 25%
Chemostat
37
0.52
0.22
0.08
0.003
0.050
ND
ND
ND
21
TSB 25%
Chemostat
15
0.65
0.23
0.43
0.04
0.138
0.34
0.03
0.097
24_1
TSB 25%
Chemostat
37
0.67
0.23
0.12
0.01
0.074
ND
ND
ND
24_2
TSB 25%
Chemostat
37
0.67
0.23
0.16
0.02
0.242
ND
ND
ND
17
TSB 25%
Chemostat
37
0.80
0.24
0.09
0.01
0.118
0.04
0.004
0.050
20
TSB 25%
Chemostat
20
1.19
0.25
0.32
0.03
0.368
0.21
0.004
0.044
13
TSB
Chemostat
37
0.92
0.40
0.20
0.02
0.059
0.02
0.003
0.087
36
TSB 25%
Chemostat
37
1.00
0.43
0.05
0.01
0.099
ND
ND
ND
38
TSB 25%
Chemostat
37
0.57
0.69
0.07
0.02
0.321
ND
ND
ND
39
TSB 25%
Chemostat
37
0.73
0.75
0.17
0.01
0.082
ND
ND
ND
41
TSB 25%
Chemostat
20
0.82
0.65
0.25
0.03
0.259
ND
ND
ND
18
TSB 25%
Chemostat
37
0.88
1.04
0.32
0.03
0.334
0.17
0.01
0.153
22
TSB 25%
Chemostat
37
1.00
1.11
0.34
0.03
0.296
0.16
0.02
0.196
15
TSB
Chemostat
37
0.75
1.26
0.37
0.03
0.373
0.17
0.01
0.141
14
TSB
Chemostat
37
1.75
1.40
0.27
0.01
0.155
0.14
0.01
0.099
31
TSB 25%
Chemostat
37
0.56
1.40
0.31
0.02
0.234
0.16
0.01
0.091
23
TSB 25%
Chemostat
37
0.69
1.41
0.40
0.01
0.046
0.14
0.01
0.164
37
TSB 25%
Chemostat
37
0.65
1.42
0.31
0.03
0.331
ND
ND
ND
11
TSB
Chemostat
37
0.64
1.50
0.31
0.01
0.107
ND
ND
ND
35
TSB 25%
Chemostat
37
0.55
1.90
0.31
0.01
0.130
ND
ND
ND
10_1
TSB
Batch
37
0.21
0.79
0.33
0.02
0.202
ND
ND
ND
10_2
TSB
Batch
37
1.61
0.69
0.23
0.02
0.223
ND
ND
ND
10_3
TSB
Batch
37
2.39
0.09
0.16
0.03
0.362
ND
ND
ND
10_4
TSB
Batch
37
2.8
03
0.07
0.01
0.085
ND
ND
ND
19_1
TSB 25%
Batch
37
0.08
1.30
0.39
0.08
0.912
ND
ND
ND
19_2
TSB 25%
Batch
37
1.30
0.20
0.05
0.005
0.054
ND
ND
ND
19_3
TSB 25%
Batch
37
1.44
0
0.01
0.01
0.066
ND
ND
ND
19_4
TSB 25%
Batch
37
1.43
0
0.03
0.02
0.065
ND
ND
ND
29_1
TSB 25%
Batch
37
0.09
1.77
0.36
0.04
0.531
ND
ND
ND
29_2
TSB 25%
Batch
37
0.98
0.23
0.09
0.01
0.074
ND
ND
ND
29_3
TSB 25%
Batch
37
1.26
0
0.01
0.002
0.032
ND
ND
ND
29_4
TSB 25%
Batch
37
0.91
0
0.01
0.004
0.052
ND
ND
ND
29_5
TSB 25%
Batch
37
1.60
0
0.18
0.01
0.054
ND
ND
ND
30_1
TSB 25%
Batch
37
0.11
1.66
0.48
0.04
0.486
ND
ND
ND
30_2
TSB 25%
Batch
37
0.96
0.43
0.17
0.01
0.152
ND
ND
ND
30_3
TSB 25%
Batch
37
1.40
0
0.02
0.005
0.114
ND
ND
ND
30_4
TSB 25%
Batch
37
1.37
0
0.03
0.002
0.159
ND
ND
ND
30_5
TSB 25%
Batch
37
1.33
0
0.02
0.002
0.129
ND
ND
ND
40_1
TSB 25%
Batch
37
0.04
0.91
0.32
0.04
0.434
ND
ND
ND
40_2
TSB 25%
Batch
37
0.76
0.60
0.35
0.01
0.067
ND
ND
ND
40_3
TSB 25%
Batch
37
1.51
0.06
0.01
0.003
0.024
ND
ND
ND
40_4
TSB 25%
Batch
37
0.96
0
0.13
0.01
0.059
ND
ND
ND
ND: not determined.
1Chemostat results are sorted by growth rate and batch results by experiment and sampling time after start of culturing, that is, along the growth curve.
2100% or 25% TSB.
3Zero growth rate indicates stationary phase in batch experiments.
4SE: standard error; RMSE: root mean squared error (the square root of the mean of the sum of squared errors).