System Analysis of LWDH Related Genes Based on Text Mining in Biological Networks
Table 1
Topological definition used in the study.
Name
Definition
Description
ASP
denotes the set of all nodes in the PPI network; denotes the shortest path between node and node
Betweenness
represents the betweenness of node , denotes shortest paths between node pairs and , and denotes that pass through the node
Closeness
is the length of the shortest path between two nodes and . The closeness centrality of each node is a number between 0 and 1
Clustering coefficient
is the number of links between all neighbors of node
Degree
The number of links to node
Eccentricity
The maximum node eccentricity () can be described as the network diameter, which is the largest distance between two nodes
Radiality
This attribute is a node centrality index computed by the diameter () of a node ’s the connected component plus 1 and subtracting the average shortest path length (ASPL)
Stress
is the number of shortest paths passing through
Topological coefficient
represents the topological coefficient of node ; is the number of neighbors shared between the nodes and , plus one if there is a direct link between and . avg is the average value of . is degree of node