610718.fig.001a
(a)
610718.fig.001b
(b)
Figure 1: Root-mean-square deviation in the three MD runs on miR-509-3p/PNA2 (a) and miR-509-3p/PNA1 (b) heteroduplexes. Superimpositions were made on the MD-averaged structures for each trajectory taking into account the whole structure (blue, orange, and purple) or only the duplex region (black, red, and green).