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BioMed Research International
Volume 2014, Article ID 624024, 7 pages
http://dx.doi.org/10.1155/2014/624024
Research Article

Performance Studies on Distributed Virtual Screening

1Center for Bioinformatics, Quantitative Biology Center, and Department of Computer Science, University of Tübingen, Sand 14, 72076 Tübingen, Germany
2Technische Universität Dresden, Zellescher Weg 12-14, 01069 Dresden, Germany
3Ludwig-Maximilians-Universität München, Butenandtstr aße 5-13, 81377 München, Germany
4Center for Research Computing, University of Notre Dame, P.O. Box 539, Notre Dame, IN 46556, USA

Received 6 March 2014; Revised 17 May 2014; Accepted 19 May 2014; Published 17 June 2014

Academic Editor: Ivan Merelli

Copyright © 2014 Jens Krüger et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Citations to this Article [8 citations]

The following is the list of published articles that have cited the current article.

  • Anthony Nguyen, Andrea Matsunaga, Mauricio Tsugawa, Susumu Date, Kohei Ichikawa, Jason H. Haga, Anthony Nguyen, Andrea Matsunaga, Mauricio Tsugawa, Susumu Date, Kohei Ichikawa, and Jason H. Haga, “Deployment of a Multi-site Cloud Environment for Molecular Virtual Screenings,” 2015 IEEE 11th International Conference on e-Science, pp. 145–154, . View at Publisher · View at Google Scholar
  • Ben Martini, and Kim-Kwang Raymond Choo, “Distributed filesystem forensics: XtreemFS as a case study,” Digital Investigation, 2014. View at Publisher · View at Google Scholar
  • Mohammad Mahdi Jaghoori, Allard J. van Altena, Boris Bleijlevens, Sara Ramezani, Juan Luis Font, and Silvia D. Olabarriaga, “A multi-infrastructure gateway for virtual drug screening,” Concurrency And Computation-Practice & Experience, vol. 27, no. 16, pp. 4478–4490, 2015. View at Publisher · View at Google Scholar
  • John J. Irwin, and Brian K. Shoichet, “Docking Screens for Novel Ligands Conferring New Biology,” Journal of Medicinal Chemistry, 2016. View at Publisher · View at Google Scholar
  • Mohammad Mahdi Jaghoori, Boris Bleijlevens, and Silvia D. Olabarriaga, “1001 Ways to run AutoDock Vina for virtual screening,” Journal of Computer-Aided Molecular Design, 2016. View at Publisher · View at Google Scholar
  • Sandra Gesing, Jens Krüger, Richard Grunzke, Sonja Herres-Pawlis, and Alexander Hoffmann, “Using Science Gateways for Bridging the Differences between Research Infrastructures,” Journal of Grid Computing, 2016. View at Publisher · View at Google Scholar
  • José-Manuel Gally, Stéphane Bourg, Quoc-Tuan Do, Samia Aci-Sèche, and Pascal Bonnet, “VSPrep: A General KNIME Workflow for the Preparation of Molecules for Virtual Screening,” Molecular Informatics, 2017. View at Publisher · View at Google Scholar
  • Natalia Nikitina, and Evgeny Ivashko, “Adaptive Scheduling for Adjusting Retrieval Process in BOINC-Based Virtual Screening,” Supercomputing, vol. 965, pp. 453–464, 2018. View at Publisher · View at Google Scholar