BLAT-Based Comparative Analysis for Transposable Elements: BLATCAT

Figure 2

BLATCAT user interface for genomic position. (a) Two types of input tabs are shown. (b) Genome and its assembly version can be changed. Users can put position information in the search term field. (c) Result appears in this field. (d) Selectable species and their genome assembly are shown. (e) The length of a given input sequence can be extended up to three times (×3). Selectable RepeatMasker options (f) and a progress bar (g) are shown. (h) The output can be saved as a HTML file.