Research Article

SSFinder: High Throughput CRISPR-Cas Target Sites Prediction Tool

Table 1

An overview of output file given by SSFinder.

Identifier Classification CRISPR-target site with “NGG” PAM PositionCondition with seed sequences Specific CRISPR-target site
Start End

Sequence_1 A or TN18A or T ACTTCTTCGTCCAACTTCTTCGG 6 28 A or TN7S11A or T ACTTCTTCGTCCAACTTCTT
Sequence_1 A or TN18G or C TTTGCAAGCCTCATCCATTGTGG 386 408 A or TN7S11G or C TTTGCAAGCCTCATCCATTG
Sequence_1 G or CN18A or T CCAAAGTTCTATTTGAGCTAAGG 68 90 G or CN7S11A or T CCAAAGTTCTATTTGAGCTA
Sequence_1 G or CN18G or C CTAACCGACCTTCAGCTAACAGG 154 176 G or CN7S11G or C CTAACCGACCTTCAGCTAAC