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BioMed Research International
Volume 2014 (2014), Article ID 750961, 9 pages
http://dx.doi.org/10.1155/2014/750961
Research Article

De Novo Assembly and Characterization of Sophora japonica Transcriptome Using RNA-seq

1Institute of System Biology, Shanghai University, Shanghai 200444, China
2Yangzhou Breeding Biological Agriculture Technology Co. Ltd., Yangzhou 225200, China
3Department of Mathematics, Shanghai University, Shanghai 200444, China
4State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210093, China

Received 25 September 2013; Revised 22 November 2013; Accepted 25 November 2013; Published 2 January 2014

Academic Editor: Tao Huang

Copyright © 2014 Liucun Zhu et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Supplementary Material

Additional file1: Information of unigenes expression in S. japonica.

Additional file2: DNA sequences of all unigenes in S. japonica.

Additional file3: Potential protein coding sequences of all unigenes in S. japonica.

Additional file4: Quality score distribution across all bases.

Additional file5: Quality score distribution over all sequences.

Additional file6: Distribution of unigenes mapped to the speciesshown by pie graph.

Additional file7: Detailed information for GO classification of unigenes in S. japonica.

Additional file8: COG functional classification list of unigenes in S. japonica.

Additional file9: Detailed information for unignenes mapping KEGG pathway in S. japonica.

Additional file10: Illustration of the whole network of unigenes in S. japonica.

Additional file11: Protein-protein interactions of unigenes in S. japonica.

  1. Supplementary Materials