|
| | ID | Property |
|
| 1 | RADA880101 | Information value for accessibility; average fraction 35% (Biou et al., 1988) |
| 2 | ROSM880101 | Information value for accessibility; average fraction 23% (Biou et al., 1988) |
| 3 | KIDA850101 | Retention coefficient in TFA (Browne et al., 1982) |
| 4 | EISD840101 | Normalized hydrophobicity scales for alpha + beta-proteins (Cid et al., 1992) |
| 5 | JACR890101 | Normalized hydrophobicity scales for alpha/beta-proteins (Cid et al., 1992) |
| 6 | COWR900101 | Consensus normalized hydrophobicity scale (Eisenberg, 1984) |
| 7 | BLAS910101 | Direction of hydrophobic moment (Eisenberg-McLachlan, 1986) |
| 8 | MEEJ810101 | Hydrophobic parameter pi (Fauchere-Pliska, 1983) |
| 9 | CIDH920104 | Number of hydrogen bond donors (Fauchere et al., 1988) |
| 10 | GRAR740102 | Number of full nonbonding orbitals (Fauchere et al., 1988) |
| 11 | ZIMJ680103 | Polarity (Grantham, 1974) [13] |
| 12 | MEEJ810102 | Hydration number (Hopfinger, 1971), Cited by Charton-Charton (1982) |
| 13 | RADA880104 | Hydropathy index (Kyte-Doolittle, 1982) |
| 14 | KUHL950101 | Hydrophobic parameter (Levitt, 1976) |
| 15 | FAUJ880110 | Conformational preference for parallel beta-strands (Lifson-Sander, 1979) |
| 16 | RADA880107 | Average surrounding hydrophobicity (Manavalan-Ponnuswamy, 1978) |
| 17 | WARP780101 | Retention coefficient in NaClO4 (Meek-Rossetti, 1981) |
| 18 | BIOV880102 | Retention coefficient in NaH2PO4 (Meek-Rossetti, 1981) |
| 19 | BIOV880101 | 8 A contact number (Nishikawa-Ooi, 1980) |
| 20 | FASG890101 | Partition coefficient (Pliska et al., 1981) |
| 21 | PONP800108 | Average number of surrounding residues (Ponnuswamy et al., 1980) |
| 22 | FAUJ830101 | Hydrophobicity (Prabhakaran, 1990) |
| 23 | CORJ870101 | Weights for beta-sheet at the window position of 2 (Qian-Sejnowski, 1988) |
| 24 | MANP780101 | Transfer-free energy from chx to wat (Radzicka-Wolfenden, 1988) |
| 25 | LIFS790102 | Transfer-free energy from chx to oct (Radzicka-Wolfenden, 1988) |
| 26 | GUOD860101 | Energy transfer from out to in (95% buried) (Radzicka-Wolfenden, 1988) |
| 27 | WOLS870101 | Mean polarity (Radzicka-Wolfenden, 1988) |
| 28 | WOLR790101 | Side chain hydropathy, uncorrected for solvation (Roseman, 1988) |
| 29 | LEVM760101 | Side chain hydropathy, corrected for solvation (Roseman, 1988) |
| 30 | WOLR810101 | Normalized frequency of chain reversal D (Tanaka-Scheraga, 1977) |
| 31 | ROSM880102 | Average interactions per side chain atom (Warme-Morgan, 1978) |
| 32 | WOEC730101 | Polar requirement (Woese, 1973) |
| 33 | PLIV810101 | Hydration potential (Wolfenden et al., 1981) |
| 34 | RADA880108 | Principal property value z1 (Wold et al., 1987) |
| 35 | FAUJ880109 | Polarity (Zimmerman et al., 1968) |
| 36 | HOPA770101 | Free energies of transfer of AcWl-X-LL peptides from bilayer interface to water (Wimley-White, 1996) |
| 37 | CIDH920103 | Hydropathy scale based on self-information values in the two-state model (9% accessibility) (Naderi-Manesh et al., 2001) |
| 38 | TANS770106 | Hydropathy scale based on self-information values in the two-state model (16% accessibility) (Naderi-Manesh et al., 2001) |
| 39 | PRAM900101 | Hydrophilicity scale (Kuhn et al., 1995) |
| 40 | ENGD860101 | Retention coefficient at pH 2 (Guo et al., 1986) |
| 41 | BROC820101 | Modified Kyte-Doolittle hydrophobicity scale (Juretic et al., 1998) |
| 42 | NADH010103 | Knowledge-based membrane-propensity scale from 1D_Helix in MPtopo databases (Punta-Maritan, 2003) |
| 43 | NADH010102 | Hydrophobicity index (Wolfenden et al., 1979) |
| 44 | KYTJ820101 | Hydrophobicity-related index (Kidera et al., 1985) |
| 45 | EISD860103 | Weights from the IFH scale (Jacobs-White, 1989) |
| 46 | NISK800101 | Hydrophobicity index, 3.0 pH (Cowan-Whittaker, 1990) |
| 47 | JURD980101 | Scaled side chain hydrophobicity values (Black-Mould, 1991) |
| 48 | WIMW960101 | NNEIG index (Cornette et al., 1987) |
| 49 | QIAN880122 | Hydrophobicity index (Engelman et al., 1986) |
| 50 | PUNT030101 | Hydrophobicity index (Fasman, 1989) |
|
