Research Article

Isolation and Expression Analysis of Novel Silicon Absorption Gene from Roots of Mangrove (Rhizophora apiculata) via Suppression Subtractive Hybridization

Table 2

Pfam domain search option for genomic and proteic annotation.

TargetDescriptionSpecies -value

Q0MX20_ARAHYSerine-rich protein Arachis hypogaea
I3S491_LOTJAUncharacterized proteinLotus japonicus
G7I9T8_MEDTRMitochondrial protein, putative
(gene: MTR_1g006300)
Medicago truncatula 0.00084
H6SIC7_RHOPHUncharacterized protein (fragment)
(gene: RSPPHO_03263)
Rhodospirillum photometricum DSM 1220.063
H6SIE2_RHOPHUncharacterized protein (fragment)
(gene: RSPPHO_03278)
Rhodospirillum photometricum DSM 1220.066
H6SID9_RHOPHUncharacterized protein (fragment)
(gene: RSPPHO_03275)
Rhodospirillum photometricum DSM 1220.08
E0XV41_9GAMMPutative uncharacterized proteinUncultured Chromatiales bacteriumHF0200_41F040.098
J2TU55_9PSEDPutative transcriptional regulator
(gene: PMI33_05795)
Pseudomonas sp. GM670.26
K9NMI2_9PSEDXRE family transcriptional regulator
(gene: PputUW4_03245)
Pseudomonas sp.UW40.27
J3FPP9_9PSEDPutative transcriptional regulator
(gene: PMI26_03923)
Pseudomonas sp. GM330.27
J2TNB7_9PSEDPutative transcriptional regulator with cupin domain-containing protein
(gene: PMI34_05211)
Pseudomonas sp.GM740.27
J2U6Q2_9PSEDPutative transcriptional regulator
(gene: PMI32_02733)
Pseudomonas sp.GM600.28
J3GM97_9PSEDPutative transcriptional regulator with cupin domain-containing protein
(gene: PMI31_04761)
Pseudomonas sp. GM550.33
J2SDC1_9PSEDPutative transcriptional regulator
(gene: PMI29_04231)
Pseudomonas sp. GM490.45
J3GDW6_9PSEDPutative transcriptional regulator with cupin domain
(gene: PMI28_00614)
Pseudomonas sp. GM480.45
D2YVG0_VIBMIPutative uncharacterized protein
(gene: VMD_37440)
Vibrio mimicus VM5730.57
B1TDE7_9BURKCupin 2 conserved barrel domain protein
(gene: BamMEX5DRAFT_5813)
Burkholderia ambifaria MEX-50.64
Q1BPU7_BURCATranscriptional regulator, XRE family (gene: Bcen_3464)Burkholderia cenocepacia (strainAU 1054)0.95
B1K857_BURCCTranscriptional regulator, XRE family (gene: Bcenmc03_5384)Burkholderia cenocepacia (strainMC0-3)0.95
D1RK09_LEGLOPutative uncharacterized protein (gene: LLB_2711)Legionella longbeachae D-49680.98