Research Article

Incorporating Amino Acids Composition and Functional Domains for Identifying Bacterial Toxin Proteins

Table 3

Statistics of InterPro functional annotations in 167 bacterial toxin proteins. InterPro classifies sequences at superfamily, family, and subfamily levels and annotates of the occurrence of functional domains, repeats, and important sites. The annotations which occur in more than five bacterial toxins are presented with the information of InterPro ID, description, and bacterial toxin proteins.

InterPro IDDescriptionNumber of bacterial
toxin proteins

IPR005639Endotoxin_N84
IPR008979Galactose-bd-like83
IPR005638Endotoxin_C82
IPR001178Endotoxin_cen_dom75
IPR015790Endotoxin_cen_dom_subgr168
IPR006123Toxin_b-grasp_Staph/Strep15
IPR006126Staph/Strept_toxin_CS15
IPR006173Staph_tox_OB15
IPR008992Enterotoxin_bac15
IPR016091SuperAg_toxin_C15
IPR006177Toxin_bac14
IPR013307Superantigen_bac14
IPR003995RTX_toxin_determinant-A13
IPR011049Serralysin-like_metalloprot_C13
IPR018504RTX_N13
IPR001343Hemolysn_Ca-bd12
IPR001340Leukocidin/haemolysin_toxin11
IPR001489Heat-stable_enterotox_STa11
IPR008985ConA-like_lec_gl_sf11
IPR013320ConA-like_subgrp11
IPR018511Hemolysin-typ_Ca-bd_CS11
IPR019806Heat-stable_enterotox_CS11
IPR000395Neurotox_Zn_protease9
IPR001869Thiol_cytolysin9
IPR011065Kunitz_inhibitor_ST1-like9
IPR012500Toxin_trans9
IPR012928Toxin_rcpt-bd_N9
IPR013104Toxin_rcpt-bd_C9
IPR013550RTX_C9
IPR015214Endotoxin_cen_dom_subgr28
IPR001615Endotoxin_CytB7
IPR003963Bi-component_toxin_staph7
IPR003842Vacuolating_cytotoxin6
IPR005015Thermostable_hemolysn_vibrio6
IPR005546Auto_transptbeta6
IPR008947PLipase_C/P1_nuclease6
IPR001024PLAT/LH2_dom5
IPR001144Enterotoxin_A5
IPR001531PLipaseC_domain5
IPR008976Lipase_LipOase5