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BioMed Research International
Volume 2014 (2014), Article ID 985706, 8 pages
http://dx.doi.org/10.1155/2014/985706
Research Article

Visualization of Genome Signatures of Eukaryote Genomes by Batch-Learning Self-Organizing Map with a Special Emphasis on Drosophila Genomes

1Information Engineering, Niigata University, Niigata-shi, Niigata-ken 950-2181, Japan
2Graduate School of Information Science, Nara Institute of Science and Technology, Ikoma-shi, Nara-ken 630-0101, Japan
3Nagahama Institute of Bio-Science and Technology, Nagahama-shi, Shiga-ken 526-0829, Japan

Received 1 November 2013; Accepted 4 February 2014; Published 11 March 2014

Academic Editor: Altaf-Ul- Amin

Copyright © 2014 Takashi Abe et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Supplementary Material

Supplemental Figures list the distribution patterns of each pair of complimentary tetra- and pentanucleotide in 100-kb DegeTetra- and DegePenta-BLSOM for the overlapping 100-kb sequences of 101 eukaryotic and 12 Drosophila genomes.

Supplementary Figure S1. Level of each pair of complimentary tetranucleotide in 100-kb DegeTetra-BLSOM for the overlapping 100-kb sequences of 101 eukaryotic genomes.

Supplementary Figure S2. Level of each pair of complimentary pentanucleotide in 100-kb DegePenta-BLSOM for the overlapping 100-kb sequences of 101 eukaryotic genomes.

Supplementary Figure S3. Level of each pair of complimentary pentanucleotide in 100-kb DegePenta-BLSOM for the overlapping 100-kb sequences of 12 Drosophila genomes.

  1. Supplementary Materials