Population Structure and Oxacillin Resistance of Staphylococcus aureus from Pigs and Pork Meat in South-West of Poland
Table 3
Clonal spa complexes of S. aureus isolates from pig nasal swabs and pork meat.
Cluster
spa
spa-CC
MLST-CC
Origin
1
t091
spa-CC 499
CC7
108
Nasal swab ( = 17) and pork meat ( = 91)
1
t4309
spa-CC 499
CC15
32
Nasal swab ( = 1) and pork meat ( = 31)
1
t084
spa-CC 499
CC15
26
Nasal swab ( = 1) and pork meat ( = 25)
1
t499
spa-CC 499
CC15
12
Pork meat
1
t346
spa-CC 499
CC15
1
Pork meat
1
t289
spa-CC 499
CC7
1
Pork meat
1
t774
spa-CC 499
CC15
1
Pork meat
1
t7568
spa-CC 499
CC15
1
Nasal swab
2
t337
spa-CC 1334
CC9
26
Nasal swab ( = 24) and pork meat ( = 2)
2
t1334
spa-CC 1334
CC9
7
Nasal swab
2
t1430
spa-CC 1334
CC9
4
Nasal swab
2
t12950
spa-CC 1334
CC9
2
Nasal swab
2
t8893
spa-CC 1334
CC9
1
Nasal swab
2
t12952
spa-CC 1334
CC9
1
Nasal swab
3
t13074
spa-CC 273
CC1
8
Pork meat
3
t1491
spa-CC 273
CC1
6
Pork meat
3
t273
spa-CC 273
CC1
3
Pork meat
4
t034
spa-CC 034
CC398
31
Nasal swab ( = 27) and pork meat ( = 4)
4
t011
spa-CC 034
CC398
37
Nasal swab
4
t8588
spa-CC 034
CC398
1
Nasal swab
5
t12954
spa-CC 12954
CC1
12
Pork meat
5
t12955
spa-CC 12954
CC1
1
Pork meat
5
t12953
spa-CC 12954
CC1
1
Pork meat
6
t1333
spa-CC 021
CC30
1
Pork meat
6
t318
spa-CC 021
CC30
58
Nasal swab
6
t021
spa-CC 021
CC30
18
Nasal swab
7
t304
spa-CC 008
CC8
1
Pork meat
7
t1187
spa-CC 008
CC8
1
Pork meat
7
t008
spa-CC 008
CC8
1
Pork meat
Singleton
t3478
CC5
2
Pork meat
Singleton
t3380
CC1
2
Pork meat
Singleton
t3358
CC101
2
Pork meat
Singleton
t015
CC45
1
Pork meat
Singleton
t078
CC25
1
Pork meat
Singleton
t127
CC1
1
Pork meat
Singleton
t156
CC12
1
Pork meat
Singleton
t267
CC97
1
Pork meat
Singleton
t9031
ST1027
1
Pork meat
Singleton
t252
CC15
1
Nasal swab
Excluded
t118
ST2811
1
Pork meat
Excluded
t519
CC7
1
Pork meat
Excluded
t1939
CC398
1
Nasal swab
Excluded
t026
CC45
1
Nasal swab
Total spa
43
Total isolates
420
MLST-CCs marked with asterisk (*) were determined in this study as described by Enright et al. (2000) [24]. For the remaining MLST-CCs, associations with the particular spa types were assessed through the Ridom SpaServer (http://spa.ridom.de) or from the relevant literature.