Prediction of Protein-Protein Interactions Related to Protein Complexes Based on Protein Interaction Networks

Table 1

Overlap ratio of predictions between our method and YU, CORE, and ALL, respectively.

Predicted set	YU	YU	O1	CORE	∪CORE	O2	ALL	ALL	O3
M	184	705	26%	51	492	10%	102	943	11%
C	94	542	17%	114	682	17%	226	1072	21%
N	344	1049	33%	197	1103	18%	432	1370	32%
N^+	294	608	48%	137	672	20%	305	1006	30%