Research Article

Phylogenetic Analysis of Hemagglutinin Genes of H9N2 Avian Influenza Viruses Isolated from Chickens in Shandong, China, between 1998 and 2013

Table 1

HA genes of 35 H9N2 AIVs isolated from Shandong of China from 1998 to 2013.

StrainsAbbreviationDate of isolationGenBank accession number

A/chicken/Shandong/WF/1998(H9N2)Ck/SD/WF/981998JF795136
A/chicken/Shandong/B1/1998(H9N2)Ck/SD/B1/981998EU573939
A/chicken/Shandong/JN/1999(H9N2) Ck/SD/JN/99 1999HM773437
A/chicken/Shandong/LW/1999(H9N2) Ck/SD/LW/99 1999HM773438
A/chicken/Shandong/241/2001(H9N2) Ck/SD/241/01 2001KF746827
A/chicken/Shandong/3/2001(H9N2) Ck/SD/3/01 2001KF313566
A/chicken/Shandong/244/2002(H9N2)Ck/SD/244/022002KF746810
A/chicken/Shandong/BZ02/2002(H9N2)Ck/SD/BZ02/022002JQ710462
A/chicken/Shandong/2/2003(H9N2) Ck/SD/2/03 2003FJ190117
A/chicken/Shandong/S2/2005(H9N2) Ck/SD/S2/05 2005HM773440
A/chicken/Shandong/JN5/2005(H9N2) Ck/SD/JN5/05 2005HM773436
A/chicken/Shandong/JN4/2005(H9N2) Ck/SD/JN4/05 2005HM773435
A/chicken/Shandong/ZC820/2006(H9N2)Ck/SD/ZC820/062006FJ190135
A/chicken/Shandong/YB06/2006(H9N2)Ck/SD/YB06/062006JQ710463
A/chicken/Shandong/LX414/2007(H9N2) Ck/SD/LX414/07 2007FJ190141
A/chicken/Shandong/LX331/2007(H9N2) Ck/SD/LX331/07 2007FJ190140
A/chicken/Shandong/LX327/2007(H9N2) Ck/SD/LX327/07 2007FJ190139
A/chicken/Shandong/SD0014/2008(H9N2)Ck/SD/SD0014/082008HQ398361
A/chicken/Shandong/1/2008(H9N2)Ck/SD/1/082008HQ326722
A/chicken/Shandong/LX316/2008(H9N2)Ck/SD/LX316/082008FJ190138
A/chicken/Shandong/BD/2009(H9N2) Ck/SD/BD/09 2009HM773434
A/chicken/Shandong/SG2/2009(H9N2) Ck/SD/SG2/09 2009HM751194
A/chicken/Shandong/SG1/2009(H9N2) Ck/SD/SG1/09 2009HM751186
A/chicken/Shandong/YT1/2010(H9N2) Ck/SD/YT1/10 2010KJ419948
A/chicken/Shandong/YT2/2010(H9N2) Ck/SD/YT2/10 2010KJ419946
A/chicken/Shandong/YT4/2010(H9N2) Ck/SD/YT4/10 2010KJ419943
A/chicken/Shandong/BD1/2011(H9N2) Ck/SD/BD1/11 2011KJ419954
A/chicken/Shandong/YT15/2011(H9N2) Ck/SD/YT15/11 2011KJ419953
A/chicken/Shandong/YT1/2011(H9N2) Ck/SD/YT1/11 2011KJ419947
A/chicken/Shandong/YS/2012(H9N2) Ck/SD/YS/12 2012KC879302
A/chicken/Shandong/WF4/2012(H9N2) Ck/SD/WF4/12 2012JX448768
A/chicken/Shandong/P6/2012(H9N2) Ck/SD/P6/12 2012JX448767
A/chicken/Shandong/HK1/2013(H9N2) Ck/SD/HK1/13 2013KJ419952
A/chicken/Shandong/LC1/2013(H9N2) Ck/SD/LC1/13 2013KJ419951
A/chicken/Shandong/LC2/2013(H9N2) Ck/SD/LC2/13 2013KJ419950