Complete Nucleotide Sequence Analysis of the Norovirus GII.4 Sydney Variant in South Korea

Table 2

Amino acid differences in the hypervariable domain of ORF2.

GII.4 variant strains

Epitopes

A

B

C

D

E

294

296

297

298

368

372

333

382

340

376

393

394

395

407

412

413

X86557 Lordsdale

1990 variant

A

S

H

D

T

N

L

K

A

Q

D

—

—

N

T

G

AY502023 Farmington Hills

2002 variant

·

T

·

N

N

·

M

·

G

E

N

G

T

S

·

·

DQ078814 Hunter504D

2004 variant

·

T

Q

N

S

S

V

R

R

E

S

T

T

D

D

S

AB447458 Saga5

2006a variant

·

T

Q

E

S

S

V

R

R

E

G

T

T

·

D

S

AB447456 Saga1

2006b variant

·

·

R

N

S

E

·

·

G

E

S

T

T

S

N

V

AB541319 Osaka1

2007 variant

·

·

R

N

A

D

M

·

S

E

S

T

T

·

·

·

AB541268 Hokkaido5 2008 Japan

2008 variant

T

·

R

N

A

D

V

·

·

D

D

T

A

S

N

S

GU445325 New Orleans1805

2009 variant

P

·

R

N

A

D

V

·

T

E

S

T

T

S

N

I

JX459908 Sydney NSW0514

2012 variant

T

·

R

N

E

D

V

·

T

E

G

T

·

S

N

T

KM272334 gg-12-08-04

T^*

·

R^*

N^*

E^*

D^*

V^*

·

T^*

E^*

G^*

T^*

·

S^*

N^*

T^*