Predicting Flavin and Nicotinamide Adenine Dinucleotide-Binding Sites in Proteins Using the Fragment Transformation Method

<div>Identification of NAD-binding sites. (a) Chain A of D-2-hydroxyisocaproate dehydrogenase (PDB ID:1DXY) was the query protein. Templates were constructed from (b) D-Lactate dehydrogenase (chain A; PDB ID:3KB6), (c) phosphoglycerate dehydrogenase (chain A; PDB ID:1YBA), and (d) C-terminal-binding protein/brefeldin A-ADP ribosylated substrate (chain A; PDB ID:1HKU).</div>

BioMed Research International

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Figure 3

Figure 3: Predicting Flavin and Nicotinamide Adenine Dinucleotide-Binding Sites in Proteins Using the Fragment Transformation Method 