BioMed Research International / 2015 / Article / Tab 3

Research Article

TLR4/NF-κB-Responsive MicroRNAs and Their Potential Target Genes: A Mouse Model of Skeletal Muscle Ischemia-Reperfusion Injury

Table 3

Potential target genes for miR-15a, miR-744, and miR-1196 in the IRI muscles, identified by computational prediction combined with RNA-binding protein immunoprecipitation microarray profiling.

AccessionGeneDefinition

miR-15a
NM_181412 Zbed4Mus musculus zinc finger, BED domain containing 4
NM_199302 Lrsam1Mus musculus leucine-rich repeat and sterile alpha motif containing 1
NM_153522 Scn3bMus musculus sodium channel, voltage-gated, type III, beta
NM_178378 IqcgMus musculus IQ motif containing G
NM_008011 Fgfr4Mus musculus fibroblast growth factor receptor 4

miR-744
NM_181412 Zbed4Mus musculus zinc finger, BED domain containing 4
NM_199302 Lrsam1Mus musculus leucine-rich repeat and sterile alpha motif containing 1
NM_019553 Ddx21Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
NM_001024602 AW555464Mus musculus expressed sequence AW555464

miR-1196
NM_181412 Zbed4Mus musculus zinc finger, BED domain containing 4
NM_177312 6330408A02RikMus musculus RIKEN cDNA 6330408A02 gene
NM_134052 Adi1Mus musculus acireductone dioxygenase 1
NM_001012450 Ankrd6Mus musculus ankyrin repeat domain 6
NM_019553 Ddx21Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
NM_010164 Eya1Mus musculus eyes absent 1 homolog (Drosophila)
NM_010517 Igfbp4Mus musculus insulin-like growth factor binding protein 4
NM_001038609 MaptMus musculus microtubule-associated protein tau
NM_008306 Ndst1Mus musculus N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
NM_001025613 Otud7bMus musculus OTU domain containing 7B
NM_145457 Paip1Mus musculus polyadenylate binding protein-interacting protein 1
NM_183028 Pcmtd1Mus musculus protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
NM_018884 Pdzrn3Mus musculus PDZ domain containing RING finger 3
NM_139269 Pla2g16Mus musculus phospholipase A2, group XVI
NM_026164 Pnpla8Mus musculus patatin-like phospholipase domain containing 8
NM_133485 Ppp1r14cMus musculus protein phosphatase 1, regulatory (inhibitor) subunit 14c
NM_001081347 Rhobtb1Mus musculus Rho-related BTB domain containing 1
NM_177766 Slc35e1Mus musculus solute carrier family 35, member E1
NM_175132 Synpo2lMus musculus synaptopodin 2-like
NM_027992 Tmem106bMus musculus transmembrane protein 106B