Research Article
Proposal of a Screening MIRU-VNTR Panel for the Preliminary Genotyping of Mycobacterium bovis in Mexico
Table 1
Allelic diversity of 24-locus MIRU-VNTR in 65 Mycobacterium bovis Mexican isolates.
| Locus | Number of copies | HGI | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 |
| QUB 3232 | | | | | 4 | 3 | | 6 | 15 | 14 | 9 | 6 | 4 | 4 | 0.86 | QUB 11a | | | | 2 | 4 | 1 | 4 | 2 | 11 | 20 | 16 | 5 | | | 0.81 | MIRU 26 | 1 | | 1 | 7 | 14 | 21 | 14 | 5 | 2 | | | | | | 0.80 | ETR A | | | | 1 | 4 | 2 | 14 | 22 | 18 | 4 | | | | | 0.77 | QUB 26 | | 1 | 23 | 27 | 10 | 4 | | | | | | | | | 0.69 | MIRU 16 | 24 | 28 | 10 | 3 | | | | | | | | | | | 0.66 | MIRU 27 | | 4 | 37 | 10 | 10 | | 1 | 3 | | | | | | | 0.63 | MIRU 39 | 2 | 36 | 14 | 10 | 1 | 2 | | | | | | | | | 0.63 | MIRU 2 | 10 | 34 | 20 | 1 | | | | | | | | | | | 0.62 | MIRU 31 | 1 | 23 | 33 | 8 | | | | | | | | | | | 0.61 | QUB 3336 | 1 | 40 | 4 | 3 | 6 | 8 | 1 | | 2 | | | | | | 0.60 | QUB 23 | | | | 16 | 39 | 7 | 2 | 1 | | | | | | | 0.58 | ETR C | 3 | 8 | 12 | 41 | 1 | | | | | | | | | | 0.56 | QUB 11b | 2 | 4 | 6 | 41 | 12 | | | | | | | | | | 0.56 | ETR B | | 1 | 2 | 40 | 21 | 1 | | | | | | | | | 0.52 | MIRU 40 | 18 | 42 | 5 | | | | | | | | | | | | 0.51 | MIRU 23 | | 1 | 24 | 40 | | | | | | | | | | | 0.49 | QUB 18 | | 9 | 45 | 9 | 2 | | | | | | | | | | 0.49 | MIRU 10 | 17 | 44 | 4 | | | | | | | | | | | | 0.48 | MIRU 4 | | | 43 | 22 | | | | | | | | | | | 0.45 | MIRU 24 | 22 | 43 | | | | | | | | | | | | | 0.45 | QUB 15 | 3 | 48 | 13 | 1 | | | | | | | | | | | 0.42 | QUB 1895 | | 12 | 50 | 3 | | | | | | | | | | | 0.38 | MIRU 20 | 8 | 52 | 5 | | | | | | | | | | | | 0.34 |
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HGI: Hunter-Gaston index.
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