Efficient Multicriteria Protein Structure Comparison on Modern Processor Architectures

Table 6

Speedup, efficiency, and throughput in pairwise-PSC tasks per second for performing MCPSC on an Intel Core i7 multicore CPU using the CK34 and RS119 datasets.

Threads	Dataset CK34			Dataset RS119
	Speedup	Efficiency	Throughput	Speedup	Efficiency	Throughput
1	1.00	1.00	4.92	1.00	1.00	3.49
2	1.88	0.94	9.27	1.46	0.73	5.09
3	2.04	0.68	10.01	1.98	0.66	6.90
4	2.54	0.63	12.47	2.60	0.65	9.08
5	2.70	0.54	13.25	2.70	0.54	9.42
6	2.71	0.45	13.32	2.71	0.45	9.45
7	2.74	0.39	13.47	2.69	0.38	9.38
8	2.64	0.33	12.98	2.67	0.33	9.31