Prediction of Drug Indications Based on Chemical Interactions and Chemical Similarities

Table 2

Best performance of the method based on chemical similarities for different types of fingerprint and values of .

Type of fingerprint	Highest 1st order prediction accuracy (%)
ECFP_2	48.70	3
ECFP_4	49.39	2
ECFP_6	49.11	5
FCFP_2	42.87	2,3
FCFP_4	48.07	3
FCFP_6	48.99	3
FP2	43.91	3
MACCS	43.39	2,3