Research Article
Predicting Long Noncoding RNA and Protein Interactions Using Heterogeneous Network Model
Table 2
The top 10 ranked proteins for lncRNA FTX, HNRNPU-AS1 and MALAT1.
| Gene | String ID | Rank | Gene | String ID | Rank |
| FTX (NONCODE ID: NONHSAT137627) | IGF2BP3 | 9606.ENSP00000258729 | 1 | TIA1 | 9606.ENSP00000401371 | 6 | FUS | 9606.ENSP00000254108 | 2 | SFRS1 | 9606.ENSP00000258962 | 7 | IGF2BP2 | 9606.ENSP00000371634 | 3 | RBFOX2 | 9606.ENSP00000413035 | 8 | TARDBP | 9606.ENSP00000240185 | 4 | EIF2C1 | 9606.ENSP00000362300 | 9 | EIF2C2 | 9606.ENSP00000220592 | 5 | QKI | 9606.ENSP00000354951 | 10 |
| HNRNPU-AS1 (NONCODE ID: NONHSAT010657) | IGF2BP1 | 9606.ENSP00000290341 | 1 | MOV10 | 9606.ENSP00000350028 | 6 | TARDBP | 9606.ENSP00000240185 | 2 | IGF2 | 9606.ENSP00000338297 | 7 | SFRS1 | 9606.ENSP00000258962 | 3 | HNRNPU | 9606.ENSP00000283179 | 8 | TNRC6B | 9606.ENSP00000338371 | 4 | STAU1 | 9606.ENSP00000360922 | 9 | TNRC6A | 9606.ENSP00000379144 | 5 | SFPQ | 9606.ENSP00000349748 | 10 |
| MALAT1 (NONCODE ID: NONHSAT022127) | HNRNPU | 9606.ENSP00000283179 | 1 | CDK9 | 9606.ENSP00000362361 | 6 | RBFOX2 | 9606.ENSP00000413035 | 2 | CTCF | 9606.ENSP00000264010 | 7 | IGF2 | 9606.ENSP00000338297 | 3 | NXF1 | 9606.ENSP00000294172 | 8 | STAU1 | 9606.ENSP00000360922 | 4 | LRRK2 | 9606.ENSP00000298910 | 9 | MEPCE | 9606.ENSP00000308546 | 5 | SSB | 9606.ENSP00000260956 | 10 |
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