JPPRED: Prediction of Types of J-Proteins from Imbalanced Data Using an Ensemble Learning Method

Table 3

Performance of JPPRED with or without feature selection by 10-fold cross validation.

Subfamily	Measure	No feature selection	Feature selection
Type I J-protein	Sn	0.905	0.921
	Sp	0.849	0.859
Type II J-protein	Sn	0.745	0.782
	Sp	0.857	0.866
Type III J-protein	Sn	0.851	0.861
	Sp	0.855	0.877
Type IV J-protein	Sn	1	1
	Sp	0.849	0.860
Dimension		256	224
AvgSn		0.875	0.891
Acc		0.852	0.862