Research Article
Agent-Based Spatiotemporal Simulation of Biomolecular Systems within the Open Source MASON Framework
Table 4
The weight, size, and diffusion rate of the molecules represented in the two-step enzymatic system.
| | Species | Molecular weight (g/mol) | Particle radius (µm) | Diffusion rate (µm2/s) |
| | Benzyl alcohol | 108.14 | 0.323 × 10−3 | 4.018 × 10−14 | | NAD+ | 661.41 | 0.657 × 10−3 | 1.975 × 10−14 | | NADH | 663.43 | 0.658 × 10−3 | 1.973 × 10−14 | | Benzaldehyde | 106.121 | 0.321 × 10−3 | 4.047 × 10−14 | | Benzoate | 121.12 | 0.338 × 10−3 | 3.843 × 10−14 |
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