Shaped 3D Singular Spectrum Analysis for Quantifying Gene Expression, with Application to the Early Zebrafish Embryo

<table class="figure-group"><tr class="fig-image" id="a"><td><object data="https://static.hindawi.com/articles/bmri/volume-2015/986436/figures/986436.fig.002a.svgz" name="986436.fig.002a" type="image/svg+xml"></object></td></tr><tr class="fig-caption"><td><b>(a) </b>Depth equalization on the sphere</td></tr><tr class="fig-image" id="b"><td><object data="https://static.hindawi.com/articles/bmri/volume-2015/986436/figures/986436.fig.002b.svgz" name="986436.fig.002b" type="image/svg+xml"></object></td></tr><tr class="fig-caption"><td><b>(b) </b>Flattened nuclei</td></tr><tr class="fig-image" id="c"><td><object data="https://static.hindawi.com/articles/bmri/volume-2015/986436/figures/986436.fig.002c.svgz" name="986436.fig.002c" type="image/svg+xml"></object></td></tr><tr class="fig-caption"><td><b>(c) </b>Interpolation to a regular grid</td></tr><tr class="fig-image" id="d"><td><object data="https://static.hindawi.com/articles/bmri/volume-2015/986436/figures/986436.fig.002d.svgz" name="986436.fig.002d" type="image/svg+xml"></object></td></tr><tr class="fig-caption"><td><b>(d) </b>Reconstructed pattern on a regular grid</td></tr></table>

<div>Processing steps in the 3D-SSA approach.</div>

BioMed Research International

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Figure 2

Figure 2: Shaped 3D Singular Spectrum Analysis for Quantifying Gene Expression, with Application to the Early Zebrafish Embryo 