Modeling Gene Regulation in Liver Hepatocellular Carcinoma with Random Forests

Table 1

List of candidate regulators.

Regulator	Avg. rank		value
Methylation	86	—	—
CNV	171	—	—
GLIS3	195	−0.61	0.008
TCF3	195	0.81
HIC2	199	0.48
ZEB1	205	−0.06	0.629
SPIB	206	−1.59	0.0019
GLIS2	208	0.52	0.05
TCF4	209	0.03	0.881
REST	209	−0.57	0.029
PKNOX2	212	−1.12	0.00017
GLI2	213	−1.33	0.0001
NFIA	214	−0.69
ID4	214	−1.24
MEF2A	215	−0.36	0.002
E2F6	216	0.15	0.187
ELF4	218	−0.25	0.28
ZBTB7C	223	−0.92	0.0002
TEAD4	223	0.62	0.02
PRDM1	224	−0.29	0.183
MEIS3	225	0.05	0.89
NR2F1	226	−0.82	0.0004
ZNF143	228	0.47
miR.766.3p	283	0.60	0.002
miR.335.3p	283	−0.17	0.39
miR.122.5p	284	−0.50	0.083