Predicting Subcellular Localization of Apoptosis Proteins Combining GO Features of Homologous Proteins and Distance Weighted KNN Classifier

Table 3

Comparison of different methods on CL317 data set.

Method	SN (%)						ACC (%)
	Cy	Me	Mi	Se	Nu	En
ID [39]	81.3	81.8	85.3	88.2	82.7	83.0	82.7
ID_SVM [40]	91.1	89.1	79.4	58.8	73.1	87.2	84.2
DF_SVM [42]	92.9	85.5	76.5	76.5	93.6	86.5	88.0
Auto_Cova [47]	86.4	90.7	93.8	85.7	92.1	93.8	90.0
FKNN [41]	93.8	92.7	82.4	76.5	90.4	93.6	90.9
PseAAC_SVM [45]	93.8	90.9	85.3	76.5	90.4	95.7	91.1
EN_FKNN [46]	98.2	83.6	79.4	82.4	90.4	97.9	91.5
PSSM-AC [44]	93.8	90.9	91.2	82.4	86.5	95.7	91.5
APSLAP [48]	99.1	89.1	85.3	88.2	84.3	95.8	92.4
Trigram encoding [50]	98.2	96.4	94.1	82.4	96.2	95.7	95.9
Our method	98.2	98.2	97.1	94.1	90.2	100	96.8