Research Article

Identification and Characterization of Small Noncoding RNAs in Genome Sequences of the Edible Fungus Pleurotus ostreatus

Table 3

Genomic loci, distance to gene boundary, and neighboring gene of miRNAs.

IDLocationStrandDistance to gene boundaryNeighbor

miR-124-5pscaffold_29_13029–13047+Introng3043
miR-190a-3pscaffold48_55792–55810+53g13155
miR-788-5pscaffold8_754188–754207Introng9721
miR-383-3pscaffold_80_111549–111567Introng8156
miR-466gscaffold8_19655–1967394g9475
miR1171scaffold_70_119604–119626+2094g7800
miR-467gscaffold_26_54067–54085147g2750
miR-190a-3pscaffold48_55792–55810+53g13155
miR1427scaffold85_42007–42025110g4652
miR2095-5pscaffold_29_43092–43110+1121g3054
miR-788scaffold8_754188–754207Introng9721
miR2673ascaffold32_244540–244559+71g12059
miR2673ascaffold25_190886–190904+Introng11628
miR2673ascaffold_15_223801–223819Introng1786
miR2673bscaffold32_244540–244559+71g12059
miR2673bscaffold25_190886–190904+Introng11628
miR2673bscaffold_15_223801–223819Introng1786
miR-2709scaffold64_62205–62223+Introng4162
miR-2783scaffold392_645–663+Introng5776
miR-190a-3pscaffold48_55792–55810+53g13155
miR156h-3pscaffold151_19717–19735Introng5461
miR4243scaffold_15_464570–464589Introng1895
miR-3677-5pscaffold61_171654–171672363g4080
miR-3775scaffold1170_174–192Introng6228
miR3948scaffold155_16079–16098+3715g5479
miR3948scaffold8_7775–7794Introng9470
miR-4459scaffold7_14624–14642+Introng9172
miR-4968-3pscaffold_14_64946–64966Introng1539
miR-4968-3pscaffold34_263134–263153Introng12318
miR-4968-3pscaffold_24_6521–6540Introng2572
miR-4968-3pscaffold3_287008–287026+Introng8829
miR-5352-5pscaffold53_49526–49544Introng13380
miR-5455-3pscaffold54_13491–13509Introng3643
miR-6012-5pscaffold14_172648–172666Introng10243
miR6214scaffold58_68922–68940Introng3823
miR-6606-5pscaffold_19_158806–158825+Introng2084
miR-7426-5pscaffold46_187269–187287+Introng13115
miR7734-3pscaffold21_198083–198101+Introng11335
miR-190a-3pscaffold48_55792–55810+53g13155
miR-8481-5pscaffold1214_35–53+Introng6248
miR-8922scaffold21_9675–9693+Introng11273
miR-8986ascaffold_4_231055–231073Introng184
miR-9189bscaffold_24_289739–289757Introng2662
miR-9400-5pscaffold3_354824–354842+Introng8861
miR-190a-3pscaffold48_55792–55810+53g13155
miR9773scaffold390_1391–1409292g5774