Using Small RNA Deep Sequencing Data to Detect Human Viruses

Table 3

SMRV and EBV from the SRP046046 study.

Run ID	Sample_Source	Reference	Cov (%)	Depth
SRR1563015	DLBCL	M23385	8714 (99.2)	146.1
SRR1563017	DLBCL Exosome	M23385	8732 (99.4)	494.5
SRR1563018	EBV(+) BL	KC207813	2765 (1.6)	29.2
SRR1563056	EBV(+) BL Exosome	KC207813	33107 (19.3)	9.6
SRR1563057	EBV(−) BL	NA	NA	NA
SRR1563058	EBV(−) BL Exosome	NA	NA	NA
SRR1563059	EBV(+) LCL	KC207813	13757 (8)	358.2
SRR1563060	EBV(+) LCL Exosome	M80517	7444 (4)	288.8
SRR1563061	EBV(+) LCL	M80517	18688 (10.2)	151.1
SRR1563062	EBV(+) LCL Exosome	KC207814	7931 (4.6)	198.2
SRR1563063	EBV(+) LCL	M80517	37898 (20.6)	52.8
SRR1563064	EBV(+) LCL Exosome	M80517	57850 (31.4)	17.6

“Run ID” is uniq for each high-throughput fastq file in the NCBI SRA database. “Reference” uses the NCBI GenBank accession number. “Cov (%)” and “Depth” represent the genome coverage and the average depth, respectively.