Research Article
A Gram-Negative Bacterial Secreted Protein Types Prediction Method Based on PSI-BLAST Profile
Table 3
The prediction quality of our method on training set and test set.
| Dataset | Class | Sens () | Spec () | MCC |
| Training set
| T1SP | 91.07 | 99.64 | 0.94 | T2SP | 79.80 | 97.18 | 0.78 | T3SP | 89.01 | 89.90 | 0.76 | T4SP | 67.74 | 98.35 | 0.72 | T5SP | 96.34 | 99.20 | 0.96 | T7SP | 81.25 | 99.35 | 0.85 | OA | 87.26 | | |
| Test set
| T1SP | 84.00 | 100.0 | 0.90 | T2SP | 100.0 | 97.90 | 0.94 | T3SP | 92.86 | 98.61 | 0.92 | T4SP | 86.36 | 98.67 | 0.87 | T5SP | 97.14 | 99.27 | 0.96 | T7SP | 96.97 | 97.84 | 0.93 | OA | 93.60 | | |
|
|