BioMed Research International

Research Article

A Novel Peptide Binding Prediction Approach for HLA-DR Molecule Based on Sequence and Structural Information

Table 1

Details of 39 MHC molecules and peptide binding complexes.
PDB IDDRB allelePeptide sequence
1AQDDRB10101VGSDWRFLRGYHQYA
1PYWDRB10101XFVKQNAAALX
1KLGDRB10101GELIGILNAAKVPAD
1KLUDRB10101GELIGTLNAAKVPAD
2FSEDRB10101AGFKGEQGPKGEPG
1SJHDRB10101PEVIPMFSALSEG
1SJEDRB10101PEVIPMFSALSEGATP
1T5WDRB10101AAYSDQATPLLLSPR
1T5XDRB10101AAYSDQATPLLLSPR
2IANDRB10101GELIGTLNAAKVPAD
2IAMDRB10101GELIGILNAAKVPAD
2IPKDRB10101XPKWVKQNTLKLAT
1FYTDRB10101PKYVKQNTLKLAT
1R5IDRB10101PKYVKQNTLKLAT
1HXYDRB10101PKYVKQNTLKLAT
1JWMDRB10101PKYVKQNTLKLAT
1JWSDRB10101PKYVKQNTLKLAT
1JWUDRB10101PKYVKQNTLKLAT
1LO5DRB10101PKYVKQNTLKLAT
2ICWDRB10101PKYVKQNTLKLAT
2OJEDRB10101PKYVKQNTLKLAT
2G9HDRB10101PKYVKQNTLKLAT
1A6ADRB10301PVSKMRMATPLLMQA
1J8HDRB10401PKYVKQNTLKLAT
2SEBDRB10401AYMRADAAAGGA
1BX2DRB11501ENPVVHFFKNIVTPR
1YMMDRB11501ENPVVHFFKNIVTPRGGSGGGGG
1FV1DRB50101NPVVHFFKNIVTPRTPPPSQ
1H15DRB50101GGVYHFVKKHVHES
1ZGLDRB50101VHFFKNIVTPRTPGG
4E41DRB10101GELIGILNAAKVPAD
1DLHDRB10101PKYVKQNTLKLAT
1KG0DRB10101PKYVKQNTLKLAT
3L6FDRB10101APPAYEKLSAEQSPP
3PDODRB10101KPVSKMRMATPLLMQALPM
3PGDDRB10101KMRMATPLLMQALPM
3S4SDRB10101PKYVKQNTLKLAT
3S5LDRB10101PKYVKQNTLKLAT
1HQRDRB50101VHFFKNIVTPRTP