Genome-Wide Identification and Characterization of bZIP Transcription Factors in Brassica oleracea under Cold Stress

Table 1

119 BolbZIP proteins were divided into 63 categories based on amino acid sequence similarity.

Index	B. oleracea			Identity 1 (%)	Identity 2 (%)	B. rapa homologs			A. thaliana homologs
	Bol number	Length (aa)	Group			Bra number	Length (aa)	Group	At number	Length (aa)	Group
1	Bol000879	311	3A	95	75	Bra004550	379	3A	At2g46270	382	3A
	Bol017742	328	3A	80	70
	Bol029580	300	11	76	79
2	Bol004832	300	11	65, 98, 62, 62	75, 64	Bra000256	362	11	At2g42380	321	4A
	Bol001886	306	11	82, 75, 61, 62	71, 65	Bra004689	306	4B	At3g58120	329	4A
						Bra007380	318	4A
						Bra003320	304	11
3	Bol005115	343	1A	62, 83,92	83	Bra000195	334	1A	At2g40620	367	1A
	Bol006882	356	1A	59, 98, 86	79	Bra004582	356	1A
	Bol020604	336	1A	88, 66, 67	66	Bra016980	342	1A
4	Bol005139	617	10	79	53	Bra016959	624	10	At2g40950	721	10
	Bol006897	639	10	65	61
5	Bol004200	281	12	59, 83, 84, 83, 60	64, 88	Bra004597	281	12	At2g41070	262	12
	Bol005146	272	12	74, 59, 60, 60, 93	69, 60	Bra007274	282	12	At3g56850	297	6B
	Bol006902	239	12	93, 59, 60, 61, 70	64, 58	Bra007276	282	12
	Bol044306	289	6B	57, 80, 79, 90, 59	61, 77	Bra014668	229	12
	Bol044413	278	12	58, 96, 95, 83, 60	65, 84	Bra016953	267	12
6	Bol006077	392	11	94	71	Bra036251	394	2B	At4G02640	417	2B
7	Bol006734	270	5B	94		Bra030310	151	11
8	Bol006735	425	5A	86		Bra030312	430	3A
9	Bol006736	466	3A	93, 55	58	Bra030314	460	3A	At2g21230	525	5A
	Bol045878	372	3A	48, 90	50	Bra031172	376	3A
10	Bol006975	149	11	95	74	Bra027855	149	12	At1g59530	148	12
11	Bol007295	334	11	94, 60, 90, 79, 94, 99	62, 92, 90, 81	Bra001443	331	11	At1g68640	452	11
	Bol010308	331	11	94, 62, 91, 81, 98, 94	65, 94, 91, 81	Bra004329	441	11	At3g12250	355	11
	Bol024000	442	11	61, 97, 61, 58, 62, 61	87, 55, 62, 59	Bra009241	310	11	At5g06950	330	11
	Bol024526	326	11	80, 58, 81, 99, 81, 80	60, 80, 81, 87	Bra028713	326	11	At5g06960	330	1A
	Bol035452	331	11	99, 61, 92, 80, 95, 94	64, 93, 90, 79	Bra034767	331	11
	Bol043902	246	11	87, 57, 89, 76, 87, 86	59, 83, 89, 77	Bra038705	334	11
12	Bol008040	380	11	67, 80, 68, 86, 57, 73	73, 77	Bra009063	364	12	At5g10030	364	12
	Bol009211	367	12	78, 98, 80, 91, 59, 82	81, 89	Bra024366	367	12	At5g65210	368	12
	Bol019052	390	12	75, 89, 77, 87, 74, 95	78, 86	Bra028604	362	12
	Bol024636	362	12	88, 80, 99, 79, 50, 71	89, 78	Bra031871	370	12
	Bol043707	364	12	97, 77, 87, 76, 46, 68	85, 75	Bra037374	314	11
						Bra037809	392	12
13	Bol008071	201	11	94, 54		Bra031845	136	12
						Bra024424	249	11
14	Bol008240	233	11	58, 90, 75, 60	62	Bra015471	392	1A	At1g06070	423	1A
	Bol023333	391	1A	73, 62, 56, 82	74	Bra018250	374	1A
	Bol041035	342	1A	95, 62, 50, 73	77	Bra021735	339	11
						Bra030637	381	1A
15	Bol008830	102	12	77		Bra005971	160	11
16	Bol009156	188	11	93	76	Bra033464	203	11	At3g51960	228	12
17	Bol009713	383	4A	85, 97	88	Bra016389	368	4A	At1g22070	384	11
						Bra031364	378	4A
18	Bol010390	198	11	94, 83, 83	87	Bra019715	193	11	At1g13600	196	11
	Bol031441	195	11	78, 98, 98	84	Bra026895	195	11
						Bra026896	195	11
19	Bol010836	134	12	98, 81	78	Bra003500	134	12	At3g62420	146	12
	Bol044598	141	12	81, 98	88	Bra007679	141	12
	Bol033132	171	11	97, 88	82, 56	Bra020735	171	11	At3g30530	173	11
	Bol043053	172	12	85, 98	88, 59	Bra025418	172	11	At5g38800	165	12
20	Bol011470	363	3A	95	69	Bra037382	367	3A	At4g01120	360	3A
21	Bol011683	96	12
	Bol037733	106	12
22	Bol011719	432	6A	92, 83	78	Bra005287	438	6A	At2g36270	442	6A
						Bra017251	396	6A
23	Bol012142	160	6A	61, 95	61	Bra003755	179	6A	At1g75390	173	11
	Bol039324	160	6A			Bra008192	165	6A
	Bol039895	178	6A	94, 62	76
24	Bol012472	170	5B	97, 85, 84	79	Bra024478	155	5B	At2g18160	171	5B
	Bol041488	169	5B	86, 85, 96	83	Bra037235	168	5A
						Bra039631	168	5A
25	Bol012703	236	12	95, 72	73	Bra037290	239	12	At2g16770	249	12
	Bol042686	244	12	80, 89	71	Bra013048	239	12
26	Bol013712	265	11	87, 63	61	Bra011580	231	12	At4g35040	261	4B
	Bol034645	255	11	64, 98	76	Bra034668	255	11
27	Bol012855	294	6A	88	54	Bra033719	266	11	At5g44080	315	5B
28	Bol013623	416	1A	89	75	Bra011485	439	1A	At4g34000	454	1A
	Bol033853	410	11	71	55
29	Bol013680	154	11	98, 89, 86	81	Bra011545	179	5B	At4g34590	159	5B
	Bol024237	148	5B	89, 97, 78	82	Bra017664	153	5B
	Bol034676	142	11	84, 82, 98	78	Bra034639	142	11
30	Bol014051	171	3A	66, 54, 66	68, 64	Bra005335	422	3A	At1g32150	389	3A
	Bol022259	422	3A	51, 50, 85	70, 62	Bra023012	403	3A	At2g35530	409	3A
	Bol027451	392	3A	96, 66, 64	63, 83	Bra023243	352	3A
	Bol039799	400	3A	62, 85, 55	58, 73
31	Bol015239	391	12	87		Bra033649	414	1A
32	Bol016052	394	12	72		Bra010722	445	4B
33	Bol016288	374	11	96, 74	72	Bra027885	373	1A	At1g58110	374	11
						Bra035464	176	1B
34	Bol016432	289	11	79, 98	84	Bra009793	291	11	At5g24800	277	5B
	Bol022397	287	11	93, 77	81	Bra020471	289	11
35	Bol016607	142	12	94	78	Bra010035	142	12	At5g49450	145	11
	Bol032354	139	12	80	76
36	Bol003614	353	1A	80, 50, 70	54, 72	Bra001742	355	1B	At1g49720	403	1A
	Bol016788	307	1B	52, 87, 52	61, 48	Bra018800	368	1B	At3g19290	432	1A
	Bol018082	133	12	83, 64, 96	59, 91	Bra037533	388	1A
	Bol031002	391	1A	74, 57, 88	53, 74
37	Bol017068	187	12	93, 83, 73	60	Bra013005	182	12	At5g60830	206	12
	Bol036259	210	12	73, 85, 95	60	Bra029353	104	12
						Bra035957	184	12
38	Bol018521	442	1A	75	57	Bra033582	446	11	At4g38900	553	1A
39	Bol018596	243	1B	69, 95	70	Bra011780	246	1B	At4g37730	305	11
	Bol028894	246	1B	94, 66	72	Bra017850	240	1B
40	Bol018688	281	11	73, 51, 92	67	Bra010504	222	11	At4g35900	285	5A
	Bol029042	270	5B	70, 66, 64	62	Bra011648	262	5A
	Bol029939	265	11	90, 59, 66	66	Bra017735	259	5B
41	Bol020032	89	11	78, 76, 100	82	Bra017359	174	11	At2g04038	166	11
	Bol032575	176	11	91, 81, 78	69	Bra025144	170	5B
	Bol042729	170	5B	80, 97, 78	77	Bra026523	89	11
42	Bol020390	389	11	88		Bra000102	366	11
43	Bol021255	194	4B	77, 73, 97	79	Bra006324	181	4A	At5g15830	186	4A
	Bol034371	178	4A	93, 71, 82	75	Bra008670	183	4B
	Bol030487	187	4B	70, 93, 75	73	Bra023540	188	4B
44	Bol021964	190	12	64	64	Bra036025	190	12	At3g49760	156	12
	Bol037334	186	12	93	64
45	Bol022925	148	5B	97, 84, 88	92	Bra001671	150	5B	At3g17609	149	5B
	Bol030865	145	5B	86, 97, 84	88	Bra021258	146	5B
	Bol038660	150	11	81, 78, 96	83	Bra022225	116	12
46	Bol023161	624	10	91, 87	59	Bra023224	593	10	At3g10800	675	10
						Bra034147	629	10
47	Bol023356	318	5A	96, 84	80	Bra030663	320	5A	At1g06850	337	5A
						Bra031541	324	5A
48	Bol024704	162	5B	85, 94	84	Bra008976	164	5A	At5g11260	168	5B
	Bol043589	164	5B	90, 88	87	Bra023317	166	5A
49	Bol026864	459	11	97	74	Bra025743	462	11	At1g19490	471	11
50	Bol027526	791	12	97	83	Bra015646	339	12	At1g77920	368	1B
51	Bol027732	371	6A	67		Bra015847	358	6A
52	Bol028631	120	11	97	73	Bra038341	120	12	At1g68880	138	12
53	Bol028975	313	3A	87	82	Bra010572	313	3A	At4g36730	315	3A
				96		Bra011701	313	3A
54	Bol033486	303	11	65	55	Bra034925	233	2B	At1g42990	295	10
55	Bol033489	250	11	84, 96	70	Bra032191	330	3A	At1g43700	341	11
	Bol043246	330	3A	99, 82	69	Bra034916	263	11
56	Bol033493	310	1B	97	71	Bra034913	222	1B	At1g35490	300	1A
57	Bol037803	266	11
58	Bol040859	266	5A	93	64	Bra015281	268	5A	At1g03970	270	5A
59	Bol041278	333	11	93	80	Bra019436	336	11	At3g44460		12
60	Bol043859	149	12	97		Bra009288	147	12
61	Bol044292	464	10	67		Bra014680	438	10
62	Bol045190	385	4A	87	51	Bra040260	364	11	At1g45249	427	1A
63	Bol045877	386	3A	85		Bra031173	387	3A

Length: amino acid length of bZIP proteins. Identity 1: homology between B. oleracea and B. rapa. Identity 2: homology between B. oleracea and A. thaliana.