Table 7: Distribution of repeats (>100 bp) in G. raimondii mt genome.

NumberSize (bp)Identity (%)Copy-1Copy-2Copy-3Type
StartEndStartEndStartEnd

R16390599.9350881114784502128565987DR
R21062499.94248091258714405137415754DR
R3913099.972295032078183392174264IR
R4253299.64499598502127673553676077DR
R576798.57141082141848440545441311DR
R659690.44257539258122414581415163646113646685DR
R750498.213353734040142948143451DR
R838082.115246552834389903389536503712504081IR/DR
R934999.71167653168001257539257191414581414233IR
R1031496.185296553273338227338539504212504520DR
R1126086.54281040281285402396402148IR
R122571004786348119256882257138413924414180DR
R13229100125112125340224959225187DR
R1421198.583458934797656235656025IR
R1520992.34329404329606670726670933DR
R1620883.17100270100476434363434173551480551686IR/DR
R171941002832028513177828178021652575652768DR
R1819492.78378565378750656201656010IR
R19175100378665378839493129492955IR
R2017499.43276747276920338558338731DR
R2117290.7261988262155604442604271IR
R2216598.18369418369582652955652791IR
R2316593.948434384505478354478516535576535738DR
R2416297.53258147258306322746322905415187415346DR
R2515697.443462134774378565378719DR
R2614889.86604752604898673561673425IR
R2714587.59236506236650634479634615DR
R2814299.33239332534142478142619DR
R2913795.625916959304260007259872510413510548IR/DR
R3013395.49478656478788576482576614DR
R3112689.68303621303744378711378588IR
R3212082.5402261402378650464650573DR
R3311899.158371283829455331455448534945535062DR
R3411884.75259617259733338550338658DR
R3511794.02281058281174650573650460IR
R3611787.18354470277212277321DR
R3711587.83337542337645604839604725IR
R38113100167103167215321673321785DR
R3911297.328175681866162601162711DR
R4011285.718487284974279997280107536105536207DR
R4111198.2162601162711532995533104DR
R4211086.36259625259733276747276847DR
R431071002825828364177977178083385823385717DR/IR
R4410694.3448734976351331351226IR
R4510499.04115134115237646183646080IR
R4610294.12404656404756587091586991IR
R4710084416288416387493179493089DR/IR
R48100857681276904396912397011528052528144DR
R8597.65384090384173454437454353IR

Boldface indicates IR copy, compared with copy-1 as control.
DR and IR: direct and inverted repeats, respectively.
IR/DR or DR/IR: both direct repeat and inverted repeat among multiple copies.