Multiple Genetic Associations with Irish Wolfhound Dilated Cardiomyopathy
Table 1
PCR primer information.
SNP
Primer pair
Forward primer sequence
Reverse primer sequence
PCR fragment length
Chr1: rs21953123 C/T
Initial primers
TCCTCTCCAAACATTAGAAAAAGACC
ACTACATATAGTCAGCTTTACAGATTG
311 bp
Additional primers
TATCGTACTTTATAATGAAAGATTGAATG
AGAATTTAATATCTGAAAATATATCAACAC
417 bp
Chr10: rs22078677 A/C
Initial primers
CCTGGTGTCAGAAACACAAGgCAC
TCAAGTAGCTTAAACTCTCAGGGCC
374 bp
Initial forward primer, additional reverse primer
TGTGTATTCATCAGCTCTTCCTAGG
161 bp
Chr15: rs22422063 C/A
Initial primers
AATCATTTGACAGTTAGGTTAACTTCC
CACAATTTGCACATTACACATTATTAAC
375 bp
initial forward primer, additional reverse primer
GCTGGTAAACATTCTTAAATTCAGCG
ATTTGAGTTTTCCCTCACATTATTGAC
443 bp
Chr21: rs22923291 G/A
Initial primers
GAAACTCCAGTCATGTTTAACTATTTG
GAAGAGCAGTAATGACTAATACgCAG
349 bp
additional forward primer, initial reverse primer
TGTTCATCTCTCACAGGACTTGAG
410 bp
Chr37: rs24025150 G/A
Initial primers
GGAAACTGGTTTCCAATGAAGAcC
ACGTAACAAGTTTGAAGTGTTGCTG
374 bp
initial forward primer, additional reverse primer
CCTGCCACCTGTGTTACTTTACGC
133 bp
DCM associated SNP locations in genome (from Philipp et al. [23]), PCR primer sequence information, if the primer pair is the initial or new primers, and resulting PCR product sizes. Primer sequence in lower case indicates a base change from the reference sequence to create a restriction digest site.