Research Article

ProFold: Protein Fold Classification with Additional Structural Features and a Novel Ensemble Classifier

Table 3

The 20 amino acids divided into 3 groups according to their physiochemical properties.

Physicochemical propertyThe 1st groupThe 2nd groupThe 3rd group

HydrophobicityRKEDQNGASTPHYCVLIMFW
Van der Waals volumeGASCTPDNVEQILMHKFRYW
PolarityLIFWCMVFPATGSHQRKNED
PolarizabilityGASDTCPNVEQILKMHFRYW
ChargeKRANCQGHILMFPSTWYVDE
Surface tensionGQDNAHRKTSECILMFPWYV
Secondary structureEALMQKRHVIYCWFTGNPSD
Solvent accessibilityALFCGIVWRKQENDMPSTHY