Identification of Pharmacologically Tractable Protein Complexes in Cancer Using the R-Based Network Clustering and Visualization Program MCODER

Table 1

Comparison of computational time and memory usage between MCODER and the MCODE Cytoscape application.

Network size	Performance
	MCODER	Cytoscape MCODE
5K edges, 2,902 vertexes	6 s.	1 m. 14 s.
100K edges, 3,786 vertexes	11 s.	3 m. 44 s.
200K edges, 4,625 vertexes	19 s.	18 m. 47 s.
Memory usage	0.45 GB	5 GB