First Insight into the Molecular Epidemiology of Mycobacterium tuberculosis Isolates from the Minority Enclaves of Southwestern China
Table 2
Spoligotypes of the 271 M. tuberculosis isolates enrolled in this study.
SIT
Lineage
Number (%)
Spoligotype description binary
1
Beijing
136 (50.2)
190
Beijing
6 (2.2)
269
Beijing
3 (1.1)
1674
Beijing
2 (0.7)
632
Beijing
1 (0.4)
265
Beijing
1 (0.4)
743
Beijing
2 (0.7)
53
T1
35 (12.9)
7
T1
2 (0.7)
86
T1
1 (0.4)
120
T1
1 (0.4)
154
T1
1 (0.4)
205
T1
1 (0.4)
373
T1
1 (0.4)
1105
T1
1 (0.4)
1166
T1
1 (0.4)
2170
T1
1 (0.4)
52
T2
2 (0.7)
848
T2
1 (0.4)
1797
T2
1 (0.4)
1890
T2
1 (0.4)
73
T2-T3
4 (1.5)
37
T3
34 (12.5)
44
T5
1 (0.4)
183
H3
1 (0.4)
42
LAM9
1 (0.4)
249
LAM9
5 (1.8)
583
MANU2
2 (0.7)
137
X2
1 (0.4)
Orphan
NA
5 (1.8)
Orphan
NA
4 (1.5)
Orphan
NA
3 (1.1)
Orphan
NA
2 (0.7)
Orphan
NA
1 (0.4)
Orphan
NA
1 (0.4)
Orphan
NA
1 (0.4)
Orphan
NA
1 (0.4)
Orphan
NA
1 (0.4)
Orphan
NA
1 (0.4)
Orphan
NA
1 (0.4)
SIT from SITVITWEB database. Representing spoligotype lineages annotated in SITVITWEB database. Number of strains with the same SIT. Orphan represents the spoligotyping type which is not found in SITVITWEB database.
