Research Article

Efficacies of Various Anaerobic Starter Seeds for Biogas Production from Different Types of Wastewater

Table 5

DGGE profiles of Eubacteria domain in initial starter seeds and six selected combinations.

Bacteria group in ADAffiliationSimilarity (%)Accession numberInitial starter seedsStart-up period
CSsSWwCSsRBwPOsRBwRBsSMwSMsPOwSWsCSw

HydrolyticPolaribacter porphyrae strain LNM-2081NR_114321.1+ (7)+ (7)+ (7)
Arcobacter cryaerophilus strain A 169/B96NR_025905.1+ (12)+ (12, 17)+ (12, 17)+ (12)+ (12)+ (12)
Sunxiuqinia faeciviva strain JAM-BA030277NR_108114.1+ (13)+ (13)+ (13)+ (13)+ (13)+ (13)
Flavobacterium psychrophilum86NR_074630.1CSs (6)
Acanthopleuribacter pedis95NR_041599.1SWs (8)
Microbulbifer donghaiensis78NR_044478.1RBs, POs, SWs, SMs (11)
Alkanindiges illinoisensis87NR_025254.1CSs, POs, SWs, SMs (12)
Gelidibacter algens89NR_026026.1RBs, SWs (20)

AcidogenicRoseateles terrae strain CCUG 5222298NR_042616.1+ (18)
Reichenbachiella agariperforans strain NBRC 1662580NR_113854.1+ (5)+ (5)+ (5)+ (5)+ (5)+ (5)
Acinetobacter johnsonii strain Mannheim 3865/6099NR_044975.1+ (20)+ (20, 21)
Maricaulis maris MCS10 strain MCS1083NR_074160.1+ (22)+ (22)
Acinetobacter sp.94AF189693.1SWs, SMs (10, 13)
Uncultured Bacteroidetes bacterium87JQ012284.1RBs, CSs, SWs (17)
Clostridium perfringens91NR_074482.1SWs, SMs (18)
Uncultured Clostridium sp.100KF003155.1POs (27)
Clostridium papyrosolvens83NR_026102.1SMs (28)

AcetogenicSmithella propionica strain LYP93NR_024989.1All (2)+ (2, 4)+ (2, 4)+ (2, 4)+ (2, 4)+ (2, 4)+ (2, 4)
Candidatus Cloacamonas acidaminovorans strain Evry89NR_102986.1+ (8)+ (8)+ (23)
Bizionia hallyeonensis strain Ty792NR_109525.1+ (10)
Marinobacter goseongensis strain En679NR_044340.1+ (16)+ (16)
Syntrophus sp.92AJ133796.1All (1)
Uncultured Syntrophaceae bacterium99GQ242556.1RBs, CSs, SWs (7, 18)
Dehalococcoides mccartyi87NR_102515.1SWs, SMs (14)
Dehalogenimonas lykanthroporepellens90NR_074337.1POs (16)
Syntrophus aciditrophicus93NR_102776.1CSs (22)
Sedimentibacter saalensis 89NR_025498.1CSs, POs, SMs (23)
Geobacter uraniireducens78NR_074940.1SWs (25)
Syntrophaceae bacterium enrichment culture97JX473531.1SWs (30)

OthersNitrosomonas communis strain NM273NR_104887.1+ (1)+ (1)+ (1)+ (1)+ (1)+ (1)
Sulfuricurvum kujiense strain DSM 1699491NR_074398.1+ (6)+ (6)+ (6)
Kordia algicida strain NBRC 10033686NR_113886.1+ (14)+ (14)+ (14)+ (14)+ (14)+ (14)
Acinetobacter radioresistens strain NBRC 10241389NR_114074.1+ (15)
Acidovorax defluvii strain BSB41198NR_026506.1+ (19)
Sulfurospirillum halorespirans strain PCE-M294NR_028771.1+ (11)
Geitlerinema sp.77NR_102448.1CSs (9)
Bacterium enrichment culture99JF947012.1RBs, POs, SMs (3)
Syntrophus gentianae strain HQgoe187NR_029295.1CSs, SWs, SMs (4)+ (3)+ (3)+ (3)+ (3)+ (3)+ (3)
Desulfococcus biacutus79NR_025406.1SWs (15)+ (9)+ (9)
Nitratiruptor sp.89NR_074874.1CSs, SWs, SMs (21)
Uncultured bacterium96JQ799939.1All (5, 24)
Thermosynechococcus elongatus79NR_074328.1SWs (26)
Shewanella amazonensis78NR_074842.1POs, SWs (29)

(Number) = band in DGGE analysis and + (number) = the presence of microorganism in DGGE band.